Polynucleobacter sp. SHI2: PSHI2_03180
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Entry
PSHI2_03180 CDS
T10386
Symbol
gabD_1
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00250
Alanine, aspartate and glutamate metabolism
poly00310
Lysine degradation
poly00350
Tyrosine metabolism
poly00650
Butanoate metabolism
poly00760
Nicotinate and nicotinamide metabolism
poly01100
Metabolic pathways
poly01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PSHI2_03180 (gabD_1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PSHI2_03180 (gabD_1)
00310 Lysine degradation
PSHI2_03180 (gabD_1)
00350 Tyrosine metabolism
PSHI2_03180 (gabD_1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PSHI2_03180 (gabD_1)
Enzymes [BR:
poly01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PSHI2_03180 (gabD_1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PSHI2_03180 (gabD_1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PSHI2_03180 (gabD_1)
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Motif
Pfam:
Aldedh
DUF3102
DUF1487
Prokineticin
Motif
Other DBs
NCBI-ProteinID:
BDW10236
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Position
complement(312250..313746)
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AA seq
498 aa
AA seq
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MNAPERMAQPSIPSLLKNPALFQEQSFINGAWKSSTSGETFSVNNPATGDIIAKVANMQT
QDALAAIDAAHVAFASWKNKLAKERSAIMRKWFNLIEANADDLAKLMTIEQGKPLAEAKG
EIMYGNSFIEWFAEEAKRVAGAVPSTTWSDKRLVVLKQPIGVCVAITPWNFPTAMITRKV
APAIAAGCTIVIKPAEQTPLSALALAVLAKEAGMPDGVFNIITADADRSIEIGKTLCASK
SVAHLSFTGSTPVGRILMAQCAPTVKKVALELGGHAPFIVFEDADIDAAVAGAVASKYRN
AGQTCVCTNRFYVHESLHDEFVEKLAKASAALPVGNGLDAGVNQGPLIDEQAIEKVERHI
ADAVSKGASLKTGGKKHALGGLFFEPTVLANVTNDMQIMTEETFGPVSAVVPFKDEADVI
AAANNTEFGLASYFYSRDIGRIWRVAEQLEYGMVGINTGLFSNEVAPFGGVKQSGLGREG
SIWGMDEYMEMKYLCIGL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaccagagcgtatggcacaaccatcaattccttcactgttaaaaaatcctgcc
ttgtttcaggaacaaagctttattaacggtgcttggaaatcttccactagcggtgaaact
ttttctgtcaataatccagcaacgggtgacattattgccaaagttgccaatatgcaaacg
caagatgccttggcagctatcgacgccgctcatgtagcatttgcatcttggaaaaacaaa
ttggcaaaagagcgttctgccattatgcgcaaatggttcaatctcattgaggccaatgca
gatgatttagccaaactcatgaccattgaacaaggcaaacctttagcggaagcaaaaggt
gagattatgtacggcaactcatttattgagtggtttgcagaagaagctaagcgcgtagct
ggagctgttccgtctacgacttggtcagacaaacgcctcgtggtcctcaagcaacccatt
ggtgtttgcgtagcgattacgccttggaattttccgacggcaatgattactcgtaaagta
gcccctgcgattgctgcgggatgtacgattgtgattaaacctgctgaacaaacaccccta
tctgctctagccttggctgttcttgctaaagaagcagggatgccagatggtgtttttaat
attattacggctgatgcagatcgctccattgaaatcggcaaaaccttgtgcgcctccaag
tctgtggcgcatttatcttttacaggctcaacccctgtaggtcgtattttgatggcgcag
tgtgcgccaacggttaaaaaagtggctcttgaacttggtggtcatgccccttttatcgtt
tttgaagatgcggacatcgatgctgcagtagctggtgcagtggcttcaaaatatcgtaat
gcaggtcaaacttgtgtctgtacgaatcgtttttatgtccatgaaagtttgcatgatgag
ttcgtagaaaaactcgcgaaagcatctgcagctcttcccgtcggaaatggtttagatgcc
ggcgttaatcaagggccactcatcgatgagcaagcgattgaaaaagtagagcgtcatatc
gctgacgccgttagtaaaggtgcttcattaaaaacaggcggtaaaaaacatgcattgggc
ggacttttctttgaaccaactgttcttgctaatgtcactaatgatatgcagattatgact
gaggaaacctttggtccagtctcagctgtggtcccctttaaagatgaggccgatgtgatc
gctgctgcaaataatacagaattcggcttggcgtcttatttttatagccgtgatatcggt
cgtatctggagagtcgctgaacaactcgaatacggcatggttggtattaatacgggctta
ttctcaaatgaagttgcgccatttggtggtgtcaaacaatccggcctaggtcgtgagggt
agcatttggggtatggacgaatatatggaaatgaaatacctctgtattgggctgtaa
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