Polynucleobacter sp. SHI2: PSHI2_04770
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Entry
PSHI2_04770 CDS
T10386
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly02010
ABC transporters
poly02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSHI2_04770
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PSHI2_04770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poly02000
]
PSHI2_04770
Transporters [BR:
poly02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
PSHI2_04770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
BDW10395
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All DBs
Position
complement(471541..472500)
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AA seq
319 aa
AA seq
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MKNYQFLLTSAVFLSFASGQAFADGEKIAVFTKNQTNPYFQAFRLGSDSAAKQMNASTTH
YVPTKPDSIPEQLGAIDDVIVKKPTGIVLIPVDYKAINPGVKKINDAGIPVVNATDRAES
GNFVNWVGADDFSTANAAGKALVKALNGQGNVVILEGVRGVIGNTNRVNGFKKAIEEAPG
IKLLASQPGNYQRLQGLQVMENLLQTYPKIDGVMAANDAMASGAIEALEGANRKALIVGI
NGSKEAVEAIKAGKMLASGDAAPFYQGCFATMSLIRSIRNLPVPKEIVFPPMVVEKATLA
NYDVAPDKQTCPAWSTIVK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattatcaatttttattgacatccgctgtatttctttcttttgcctctggccaa
gcttttgctgacggtgaaaaaattgctgtttttactaaaaaccaaactaatccatatttt
caagcttttcgcttaggttcagactcagctgctaagcagatgaatgcatcaacaacacat
tacgtcccaacaaaacctgacagtattcctgagcaattgggtgcaattgatgatgtgatt
gtaaaaaaaccaacgggtattgttttaatcccagtggattacaaagcgataaatcctgga
gtaaaaaaaattaatgatgcaggaattcctgtagtcaatgcaactgatcgggctgagagt
ggtaactttgtcaattgggtaggtgctgatgatttctcaactgcaaatgctgcaggaaaa
gccttggttaaagccttaaatggtcagggtaatgtggtcattcttgagggtgtgagaggt
gttataggaaataccaatcgtgtcaatggttttaaaaaagcaattgaagaagctccggga
ataaaactcttagcatcgcaacctggtaactatcaacgcttgcagggtttacaagtgatg
gaaaatttattacaaacctatccaaaaatcgatggtgtcatggctgcaaacgatgccatg
gcaagtggcgcaatcgaagctttagaaggtgcaaatcgtaaagcattaatcgtgggtatc
aatggcagtaaagaagccgttgaagctatcaaagctggcaaaatgctagcgagtggcgat
gccgctcctttctatcaaggatgttttgcaacgatgtcattgattcgctccattcggaat
ctgccagtccctaaagagattgttttcccgccaatggttgttgagaaagccactcttgct
aattatgatgtcgcaccagataaacaaacctgcccagcttggagcacgattgttaaataa
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