Polynucleobacter sp. SHI2: PSHI2_05410
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Entry
PSHI2_05410 CDS
T10386
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00230
Purine metabolism
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
Module
poly_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PSHI2_05410 (purD)
Enzymes [BR:
poly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
PSHI2_05410 (purD)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
CPSase_L_D2
ATP-grasp_3
RimK
Dala_Dala_lig_C
ATP-grasp_2
ATP-grasp_5
ATP-grasp_4
CW_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDW10459
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Position
complement(537437..538720)
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AA seq
427 aa
AA seq
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MKILVVGSGGREHALAWKIAQSPKVQMVYVAPGNGGTPFESKHLHGITNIPITDIAELAL
FAEVEKIAYTVIGPEKPLSEGIVDVFRAKGLKVFGPTQKAAQLESSKDFAKAFMKRHGIP
TADYETFHDALAAHAYIDQKGAPIVIKADGLAAGKGVVVAMNLEEAHQAVDMMLSDNKLG
NAGARVVIEEFLTGEEASFIVMVDGKNILPMATSQDHKRLLDHDQGPNTGGMGAYSPAPV
VTPELHAKVLRQIIKPTVEGMAKDGIPFTGFLYAGLMISPNKEVKTLEFNCRMGDPETQP
IMARLKSDFVDVLMHADNQTLDQVELQWDPRVALGVVMAAHNYPNTPRSGDEITGIPEES
EHHIVFHAGTSFKDGKLVTSGGRVLCVVGLDGNVKGAQTRAYEALKSIQFNGSQYRTDIG
HLAIKTK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattagttgtaggatctggcggcagagaacatgccctagcgtggaaaattgcc
caatcacctaaggtacaaatggtctatgttgccccgggaaatggtggcactccatttgaa
tcaaaacatcttcatgggattaccaacattccaattacggatattgcagaacttgcgcta
tttgcggaagttgaaaaaattgcgtacaccgtcatcggtcctgaaaaaccattatctgaa
ggtatcgtcgatgtttttcgtgcaaaaggattaaaagtttttggtcccacgcaaaaggct
gcgcaactagagtcttccaaggattttgcaaaagcgttcatgaaacgtcatgggattcct
acggcagattatgaaacctttcatgacgctttagcagcgcatgcatacatcgatcaaaaa
ggtgctcctatcgtcatcaaggcggatggcttagccgcgggtaaaggggttgttgttgcg
atgaatctagaagaggctcatcaggcggtagatatgatgttaagtgacaataaattaggc
aatgctggcgcgcgtgttgtcattgaagaatttttaacaggtgaagaagccagtttcatt
gtcatggtagatggtaaaaatattttaccgatggcaactagccaagatcataagcgcctc
ttagatcatgaccaaggacccaatacgggtggcatgggcgcttattcaccggcacctgtg
gtcactccagaattacatgccaaagtattgcgtcaaattattaaacctacggttgaagga
atggctaaagatggtattccgtttacgggtttcttatatgcaggtctgatgattagcccc
aataaggaagttaaaacgcttgagtttaattgccgtatgggtgatcctgaaacgcaaccg
attatggcaagactcaaaagtgattttgttgatgttttaatgcatgcggataaccaaaca
cttgatcaagtcgaattacagtgggatccaagggtggctctgggggttgtgatggcagcg
cataactaccctaatactccaagaagtggtgatgaaattactggtattcccgaagaaagc
gagcaccacatcgtgtttcatgccggcacaagcttcaaagatggtaagctagtcactagt
ggtggtcgagttctgtgtgttgtaggtcttgacggaaatgtgaagggggctcaaactcgt
gcctatgaggctttaaaatctattcaatttaatggctctcagtatcgaactgatattggg
caccttgcgataaaaacgaaataa
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