Polynucleobacter sp. SHI2: PSHI2_05890
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Entry
PSHI2_05890 CDS
T10386
Name
(GenBank) ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00330
Arginine and proline metabolism
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PSHI2_05890
Enzymes [BR:
poly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PSHI2_05890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BDW10507
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Position
583163..585415
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AA seq
750 aa
AA seq
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MKLKFPIVVIDEDFRSENISGSGIRDLAESIQNEGMEVLGLTSYGDLTSFAQQAARASCF
ILSIDDEEFIDPDPEGMTKIIEEIRLFVKAVRRRNEDIPIFLYGETKTSRHIPNDILREL
HGFIHMNEDTPEFVARHIIREAKVYLDSLAPPFFKSLIHYASEGSYSWHCPGHSGGVAFL
KSPVGQIFHQFFGENMLRADVCNAVEELGQLLDHTGPVAASERNAARIFGVDHLYFVTNG
TSTSNKIVWHSTVAPGDVVIVDRNCHKSVLHSIMMMGAIPVFLMPTRNNFGIIGPIPKEE
FEWANIQKKIDNNPFIKDKNVMPRVLTITQSTYDGVVYNVEMIKEMLDGRVDSLHFDEAW
LPHATFHDFYKNMHAVGRDRNRPKKSLVFATQSTHKLLAGISQASQILVQDSEDRKLDPT
CFNESYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIAEAIDFRRAMLKVDEEYG
HDWWFKVWGPDHLSDSGIGVQDDWILHKNDTWHNFGNLAEGFNMLDPIKATVVTPGIDIE
GNFGVEGVPASIVTKYLAEHGVIVEKTGLYSFFIMFTIGITKGRWNTLVAELQQFKDHYD
KNMPIWRVLPDFATKFPQYERMGLKDVANKIHDFYRSHDVARMTTEMYLSDMIPAMPPSE
AFAKMAHRDIERVNIDDLENRITAMLVTPYPPGIPLLIPGERFNKRIVDYLKFAREFNEK
FPGFETDIHGLVKEEVHGRKTYFVDCVKNT
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaatttcccatcgttgttattgacgaagactttcgctcagaaaacatctca
ggttctggcattcgtgatctagccgaatccattcaaaacgaaggtatggaggttttgggt
ttaaccagctatggtgatttgacttcatttgcacaacaggcagcacgagcttcttgtttt
attttgtcgatcgatgatgaggagtttattgatcctgacccagagggcatgacaaaaatc
attgaagaaatccgcttgtttgtaaaagcggttcgtcgtcgtaatgaagatattccaatc
tttttgtatggcgaaaccaagacatctagacatattccgaacgatattttgcgcgagttg
catggctttattcacatgaatgaagacactccagagtttgtggcacgtcacatcattcgt
gaagcgaaggtctacttagattctttagcgccaccatttttcaaatcactcattcattac
gcatctgagggatcgtattcttggcattgcccaggtcactccggcggcgtcgctttttta
aagagtccagttggacaaatattccatcagttttttggtgagaacatgcttcgtgccgac
gtttgtaatgcagttgaagagctcgggcagttgttggatcatacaggtcctgtagccgca
tctgagcgtaacgcggcacgcatctttggtgttgatcatttatattttgtgaccaacggc
acatctacttccaataagattgtttggcattccactgtagccccaggtgatgtcgtgatt
gtagatcgtaactgtcataagtcagtactgcactcgatcatgatgatgggcgccatcccc
gtatttttaatgccaacgcgtaataatttcggcattattggcccgattccgaaagaagag
tttgagtgggcaaatatccaaaagaagattgataacaatccatttattaaagataaaaat
gtgatgccgcgtgttttgacaattacgcaaagtacctatgatggcgttgtgtataacgtg
gagatgattaaagagatgttagatggaagagtggactccctgcactttgatgaagcatgg
ctgccacatgcaaccttccatgatttttataaaaacatgcatgcagtaggacgtgatcga
aatcgtccaaagaaaagtttagtatttgcaacacaatcgacgcacaaattattagcgggt
atttctcaggcatcgcaaattttggtgcaagactctgaagatcgtaaattagatccaacg
tgttttaatgaatcgtatttgatgcatacctcaacgagccctcagtacgccattattgct
tcatgtgacgttgcagctgcaatgatggagccaccaggcggtactgcgcttgttgaggaa
tcgattgctgaggctattgattttcgtcgcgccatgttaaaagtagatgaagagtatgga
catgactggtggttcaaagtttggggcccggatcatttatctgactcaggtattggtgtt
caagatgattggattttgcataaaaatgatacttggcataactttggcaatttagctgaa
ggcttcaatatgcttgatccaatcaaggcaaccgtagtgactcctggcatagatattgaa
ggtaactttggtgtagaaggtgtccctgcaagtatcgtgaccaagtatctggctgagcac
ggcgtgattgttgaaaaaaccggtttatattctttctttatcatgttcacgattgggatt
acgaaaggtcgttggaatacgctcgtcgcggagttacagcaatttaaagaccattacgac
aaaaatatgccaatttggcgtgttttgccggattttgcaactaagttcccgcaatatgag
cgcatgggcttaaaagatgttgccaataaaatccatgatttttacagaagtcatgacgtg
gctcggatgaccactgagatgtatttatcggatatgattcctgcgatgcctccttcagaa
gcttttgcaaaaatggcacaccgtgatattgaacgtgtgaatattgacgatttagaaaat
cgcattacagcgatgttagtcacgccatatccaccggggattccgttgctcatacccggc
gaacgtttcaataaaaggatcgtggattatttgaaatttgccagagaattcaatgagaag
ttcccaggctttgaaactgacattcatggcttggttaaagaagaagtgcatggtcgcaag
acttacttcgtggattgtgtgaagaacacctaa
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