Polynucleobacter sp. SHI2: PSHI2_08600
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Entry
PSHI2_08600 CDS
T10386
Symbol
clpB
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
poly03110
]
PSHI2_08600 (clpB)
Chaperones and folding catalysts [BR:
poly03110
]
Heat shock proteins
HSP100
PSHI2_08600 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
AAA_14
Sigma54_activat
NBD_SMAX1
bpMoxR
ATPase_2
IstB_IS21
nSTAND3
AAA_7
Mg_chelatase
AAA_24
AAA_25
AAA_18
TniB
AAA_3
NACHT
ABC_tran
T2SSE
FlxA
AAA_19
ATP_bind_1
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
BDW10778
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Position
845134..847722
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AA seq
862 aa
AA seq
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MRIEKLTTKFQEALAEGQSMAVSADNQFIEPEHVLLALLNDKEGSARSLLTRAGVNTSAL
EKSIETIAQKLPQVEGSGDVQVGRSLGAWLNLTEKEANKRGDQFVAVELFLLVLADDKGD
LGKAAKAAGLSRKSLEATIDAVRGGQSVNSNDAESQREALKKYTVDLTERARMGKLDPVI
GRDDEIRRVIQILMRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLD
MALLLAGAKFRGEFEERLKAVLSDIAKDEGQTIVFIDEIHTMVGAGKTEGSMDAGNMLKP
ALARGELHCIGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELHH
GVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLERRIIQ
LKIEREAVKKEKDEASIKRFDLIEEEISRLGKELADLEEIWKSEKGAAQGTAHIKEEIDR
VRADIVKLQREGKLDKVAELQYGKLPELEGKLKSAATAEEVPGVKKNKLLRTQVGAEEIA
EVVSRATGIPVSKMMQGERDKLLSMEEKLHDRVVGQDDAIAAVANAIRRSRAGLSDEGRP
YGSFLFLGPTGVGKTELCKALASFLFDSDEHMIRIDMSEFMEKHSVSRLIGAPPGYVGYE
EGGYLTELVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMT
SNLGSPIIQAMVGQPQEDIHDAVWNEVKDHFRPEFLNRIDEVVVFHALDKAQITSIAKIQ
LQRLIERLAKMDMQLYVSDAALLKIADAGFDPVFGARPLKRAIQQSIENPISKLILEGKF
GPKDLIPVDVENNEFVFTRKVH
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
gtgagaattgaaaaactaactactaagtttcaagaagccttggctgaaggtcaaagcatg
gcagtcagtgctgacaatcaatttattgagccagaacatgtgttgttggctcttttaaat
gacaaagagggatctgcccgaagtttattaaccagggcaggtgtcaatacttctgcgtta
gaaaaaagtattgagaccatcgcgcaaaaattacctcaggttgaaggctcgggtgatgtt
caggttggtcgaagtctaggtgcttggttaaacctaacagaaaaagaggccaataagcgt
ggggatcagtttgttgctgttgaattatttttattagtgttggcggatgataaaggtgat
ttaggaaaggctgctaaagcagcaggattgtcccgtaaaagtttagaagcgaccattgat
gcagtccgaggagggcagtctgtgaatagtaatgatgcagaaagtcaacgtgaagcgctg
aaaaaatatacagtcgatttaacggaacgtgcacgtatgggtaaactcgaccctgtgatt
gggcgtgatgatgagattcgtcgcgttattcaaattttaatgcgtcgcactaaaaataat
ccagtgttgattggtgagcctggtgtaggaaaaacagctatcgttgaaggacttgcgcag
cggatagtaaatggtgaagttccggagtcactaaagaataaacgtgtgctagttttagac
atggctttactcttagctggcgcaaaatttcgtggtgagtttgaggagcgtttaaaagct
gttttatctgatatagctaaagatgaaggtcaaacaattgttttcatcgatgaaattcac
accatggttggtgctggcaaaacagaaggatcgatggatgccggcaatatgctaaagcca
gctctcgctcgaggggagttacattgtattggtgcaacaactttagatgagtaccgtaag
tatattgaaaaagatgcagctcttgagcgacgctttcaaaaggtacttgtagatgagccc
agtgttgaggcaaccattgcgattcttcgtggcttacaagaacgttatgagttacatcat
ggcgtagaaattactgatccagcgattgtggctgcggcagagctttctcatcgatatatt
accgatcgttttttaccggacaaagccattgatttaattgatgaggctgcctcaagaatt
aagatggaaattgattcaaagcctgaagtgatggataagttagagcgtcgcattattcaa
ttaaaaattgaacgagaggcggtgaaaaaagaaaaagatgaagcttctattaagcgtttt
gacttgattgaagaggaaattagccgcctaggaaaagagttggcagatcttgaagaaatt
tggaagtcagaaaaaggtgctgcgcagggtacggcacacattaaagaagaaattgatcga
gtaagagcagatattgttaagttacaacgagagggtaagctcgataaagtagcggagttg
cagtatggaaaattacccgagttggagggtaagttaaagagtgctgccacagctgaagaa
gttcctggagtgaagaaaaataaactcttaagaacccaagtgggggctgaagaaattgcg
gaagtcgtttctcgtgccaccgggatacctgtttcgaaaatgatgcagggtgaaagagat
aagttacttagcatggaagaaaagttgcacgatcgggtggtgggtcaagatgatgcaata
gccgccgtcgccaatgccattcggagatcgagggcaggtttatctgatgaagggagacct
tatggttccttcttatttttaggtcctacaggcgttggtaaaacagaattatgcaaagct
ttagcctcttttttgtttgatagcgatgagcatatgattcggattgacatgagtgagttc
atggaaaaacatagtgtgtcaagactcataggagcccctccaggatatgtggggtatgaa
gagggtgggtatttaactgagcttgttaggcgtaaaccatacagtgtgattttgctagat
gaaattgagaaggctcatccagatgtatttaatgtcttgttgcaagtactagatgatggt
cgcatgacggatggtcaaggtcgaactgtcgattttaaaaacacagtgatcgtcatgacc
agtaatctcggttcacctattattcaggcgatggtgggtcagcctcaagaagatattcat
gatgcggtatggaatgaagtaaaagatcattttcgtccagagttcttaaatcgcattgat
gaagtggttgttttccacgcattggataaagcccaaattacatccattgcaaagattcag
ttacagcgcttaattgaacgtttagcgaagatggatatgcagctctatgtgagtgatgct
gctttattaaaaattgcggatgcagggtttgatccagtatttggagcaagaccattgaag
cgagcgattcagcaatcgattgaaaatccgatttcgaaattgattttggagggtaaattt
ggtcctaaagacttaattccggttgatgttgaaaataatgagttcgttttcaccagaaaa
gtccattaa
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