Polynucleobacter sp. SHI2: PSHI2_12770
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Entry
PSHI2_12770 CDS
T10386
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poly03016
]
PSHI2_12770 (truA)
Enzymes [BR:
poly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PSHI2_12770 (truA)
Transfer RNA biogenesis [BR:
poly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSHI2_12770 (truA)
Prokaryotic type
PSHI2_12770 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
SAPS
Motif
Other DBs
NCBI-ProteinID:
BDW11195
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All DBs
Position
complement(1298595..1299470)
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AA seq
291 aa
AA seq
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MIFQAPSGNSNELRRIAIGIQYDGSPYCGWQSQVQQATIQDHIESAISHFIGGFKEPIIR
LTAAGRTDTGVHALGQVAHFDTVVERPDWSWVRGLNSFLPPSISIQWAKEVPFEFDARFS
AYERSYAYYLITSPVKTPLLHRKAGFHMLPSNKSLRVDDMRQAVTYLLGEHDFSCFRSSE
CQSKTPVKNLYQIDIIEEGVKVFFFFRANAFLHHMIRNIMGSLLHVGLGKESADWFGELL
LKKDRSNAAPTFSADGLYLAQVGYPNQFEIPLPHFDLSVIPSAYLHTAFRT
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttcaagcaccatcagggaacagtaacgaattaagacgaattgccattgggatc
caatatgatggttctccatattgtggttggcaaagtcaagttcaacaagcgaccatacaa
gaccatattgaatctgcaattagtcacttcattggtggatttaaagagccaattattcgc
ttaaccgctgccggaagaacagacactggagttcatgcactgggtcaagtagcacatttt
gatacagtagttgaacgaccagattggtcatgggttaggggtttaaatagttttttaccg
ccatcgatttctatccaatgggcaaaagaagtaccattcgaatttgatgctagatttagt
gcttatgagcgatcctacgcctattatttaattacttcaccagttaaaacacccctgtta
caccgaaaggctggttttcatatgttgccgtcgaataagtccttgcgcgttgatgacatg
cgtcaagcggtgacttatttacttggtgagcatgacttttcttgttttagatcatctgag
tgtcaaagtaaaacccccgtgaaaaatttatatcaaatcgatattattgaagaaggggtg
aaagtgttcttttttttcagagcgaatgcttttttacatcatatgattcgtaatattatg
ggaagtttgttgcacgttggtcttggcaaagaatcagcggactggtttggtgaacttcta
ttaaaaaaagatcgatcgaacgctgcgcccacgttttccgcggatgggttatatttagct
caggtaggctatcctaatcaatttgaaataccattacctcattttgatttaagtgttatt
ccctcagcatatttacacacagcgtttcgtacttag
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