Polynucleobacter sp. SHI2: PSHI2_12870
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Entry
PSHI2_12870 CDS
T10386
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00020
Citrate cycle (TCA cycle)
poly00190
Oxidative phosphorylation
poly00650
Butanoate metabolism
poly00720
Other carbon fixation pathways
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
poly01120
Microbial metabolism in diverse environments
poly01200
Carbon metabolism
Module
poly_M00009
Citrate cycle (TCA cycle, Krebs cycle)
poly_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
poly_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSHI2_12870 (sdhA)
00650 Butanoate metabolism
PSHI2_12870 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PSHI2_12870 (sdhA)
00720 Other carbon fixation pathways
PSHI2_12870 (sdhA)
Enzymes [BR:
poly01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PSHI2_12870 (sdhA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
FAD_binding_3
Thi4
HI0933_like
GIDA
NAD_binding_7
Lycopene_cycl
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BDW11205
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Position
complement(1308026..1309804)
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AA seq
592 aa
AA seq
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MAAIKSAIPRRRFDVVIVGAGGAGMRASLQLAEAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGADWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKAVQRACAAADRTGHAMLHTLYQRNVRARTQFFVEWMALDLIRDADG
DVLGVTAMEMETGDIHILEAKCTMFATGGAGRIWQASTNAFINTGDGMGMTARAGIPLED
MEFWQFHPTGVAGAGVLLTEGCRGEGGILRNKDGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVVLDLTHIGAETIHKRLPSVYEIGINFANVDVTKEPIPVVPTIHYQ
MGGIPTNIHGQVVAPKNGNPNDIVNGFYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAG
NHVVSTALKQKEHKPLPADAADYALSRVAALDSSTSGEYTQDVANEIRNAMQKHCGVFRT
QKIMDDGVVKMAELTEKAKHIHLKDKSKTFNTARVEALELANIVEAANSTMYSAAARQES
RGAHAHDDCPDRDDENWMKHTLWYKENNRLDYKPVNLQPLTAESIPPKVRTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcagctataaaatcagctattccacgcagacgttttgacgtggtgattgttggagca
ggtggagcaggaatgcgtgcttctttacagttggcagaagcgggacttaatgtcgccgtg
ttgtctaaagtcttcccaacgcgttcacatacagttgctgcgcaaggtggtattggagca
tctcttggcaacatgagtgaagataattggcactaccatttttacgacacgattaaaggt
gcggactggttaggtgatcaagatgctattgagttcatgtgccgtgaagctcccaaggtc
gtatatgagttagagcattttggtatgccatttgaccgcaatccagatggtactatttat
cagcgtccattcggtggtcacactgcaaattacggcgagaaagctgttcaaagagcatgt
gcggcggcagatcgaactggccatgccatgttgcataccctatatcaaagaaacgtccgt
gcgcgtacacagttttttgtagagtggatggctttggatttaattcgtgatgcagacgga
gacgttcttggtgttaccgccatggaaatggaaacaggtgacatccacatcctcgaagct
aaatgtacgatgtttgcaaccggtggtgctggccgtatttggcaagcttctactaatgct
ttcatcaataccggtgacggtatgggtatgactgctcgtgcaggaattccattagaagat
atggagttttggcaatttcacccaacaggggtcgccggagctggtgtcttgttaactgaa
ggttgtcgtggtgagggtggtattttgcgcaacaaagatggggagcgttttatggaacgt
tacgcacctacactgaaggatttagcgcctcgtgactttgtttctcgctcaatggatcaa
gaaattaaagaaggtcgtggctgtggaccgaatggtgattacgttgtattagatttaacg
catattggtgctgagacgattcataaacgcttaccatctgtttatgagattggtattaac
tttgccaacgtggacgtgacaaaagagccaattcctgtcgttccaactattcactatcaa
atgggcggtattccgacgaatattcatggtcaagtggtggcaccgaagaatggtaatccc
aatgatattgtcaatggattttatgcagtaggtgaatgttcttgtgtttctgttcatgga
gcaaatcgccttggaacaaactcattacttgacttattagtctttggtcgtgctgctggt
aatcatgttgtttcaaccgctctaaagcaaaaagaacataagccgttgcctgctgatgca
gctgattatgcgttatctcgagttgctgccttggatagttctacctcaggtgaatatacc
caagatgtagccaatgaaatacgtaatgccatgcaaaaacattgcggcgtatttagaacg
caaaaaatcatggatgacggtgtcgtcaaaatggcagagttaactgaaaaagccaagcat
attcacttaaaagataaatctaagacctttaacacggctcgtgttgaagctttagagtta
gcgaatattgtggaagctgcgaattcaacaatgtactcagcagcagctagacaagaaagt
cgtggagcccatgcgcacgacgactgtccagatcgcgatgatgaaaactggatgaagcat
actctttggtataaagaaaacaatcgtttagattacaaaccagtcaatctacagccttta
actgctgaatctattccacctaaagttcgtactttctaa
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