Polynucleobacter sp. SHI2: PSHI2_13610
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Entry
PSHI2_13610 CDS
T10386
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poly03009
]
PSHI2_13610
Enzymes [BR:
poly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PSHI2_13610
Ribosome biogenesis [BR:
poly03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSHI2_13610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
tify
Motif
Other DBs
NCBI-ProteinID:
BDW11279
LinkDB
All DBs
Position
complement(1381326..1383098)
Genome browser
AA seq
590 aa
AA seq
DB search
MTENDIPDGAPKLPKMESSEQTAVSDQTSTGAQEGAASTEPRRPRNPRFGRKGGKFGPKR
PRPEDGTQEPIQASEDGPSTPKSNRHRPASRGPHARASASNKPNPIKEQSEMLFAQVVSG
EFDAILETPEKPEASLNGEMSDDQSQAVIVDPSLKALEDAQSRDWKEDHDGESSESDEPI
QQYQFANVNELPMSMRDEVWSDLDGLDDDVEDEDTVKLHKVLADAGMGSRREMEDLIIQG
RVSVNSMPAHIGQRIGATDQVRINGKLVHRKIQTKPPRVLMYHKPTGEIVSQSDPEGRPT
VFDRLPKAKNGRWIAVGRLDFNTEGLLLFTTSGELANRLMHPRYGIEREYAVRIFGELEH
EQTQLLKNGVTLEDGVAKFLRLADGGGDGSNRWYHVALTEGKNREVRRMFEAVGHMVSRL
IRTRYGIFVLPPRLRRGQFDEVPADQVVQLMKMAGLKTANLALSGTGKPHQRGQDRQQDS
HGQPDPMQTSVSYWGSREALKMADGRLGLTQHKSGQNGQTGNGHHPSGAKKNGRSNQGRP
GARVSHEHGFAGATGNGGPNPRNARNSKNTKNRPKSNFKGPRPKKSSDLG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacgacatacctgatggtgcaccaaagttgcctaaaatggagtcatcagag
caaactgcagtttcagatcagacttctactggagctcaagagggtgcagcaagcacagaa
cctaggcgtccaagaaatcctcgatttggtcgcaagggtggtaagtttgggcctaaaaga
ccgcggcctgaagatggtacccaagagccaattcaagcatctgaagacggcccatcaacc
cctaaatcgaatcgacatcggcctgcgagcagagggccacatgcaagagcttctgcaagt
aataaacctaacccgatcaaagaacaaagtgagatgttgtttgctcaggttgtctcgggg
gagtttgatgcgattttagaaaccccagaaaagccggaagcctcattgaatggtgaaatg
agtgatgatcaatcccaagcagtgattgttgatccaagtttaaaagccctagaagatgct
cagtcgcgagactggaaagaggatcacgatggcgagtcatccgaatcagatgagccaatt
cagcaataccaatttgcaaatgtcaatgaattaccaatgtcgatgcgagacgaagtttgg
tcagatctcgatggcttagatgatgatgttgaagacgaagataccgttaaattacataaa
gtactagctgatgctggtatgggatcgcgtcgagaaatggaagatttaataatacaaggg
cgagtttccgtcaatagtatgccggcgcatattggacaacgtattggtgcaactgatcaa
gttcgcattaatggcaaactggtacatcgtaaaattcagactaaacctcctagggtattg
atgtatcacaaacctactggcgagattgttagtcagtccgatccagaagggcgtcctaca
gtatttgatcgtttacccaaggctaaaaatggccgatggattgcagtaggtcgtctagac
ttcaataccgaaggactgttactgtttaccacctcaggtgagttagctaatcgactcatg
cacccaagatatggcattgagagggagtatgcagttcgtatttttggtgaactagagcat
gagcaaacgcaactcttaaaaaatggtgtgactctagaagacggtgtggctaaattttta
cgacttgcagatggtgggggtgatggatccaatcgttggtatcacgttgctttgacagag
ggtaaaaatcgcgaagttcgaagaatgtttgaagcggttggtcacatggtgtcgcggtta
attcgaacaagatacggtatatttgtgcttcctcctcgcttgagaagagggcaatttgat
gaagtaccagcggatcaagttgtgcaactgatgaagatggctggtttaaaaactgctaat
ttagccctttccggaacaggtaagcctcaccaacggggtcaagatcgtcagcaagatagt
catggtcagcctgaccctatgcagacgtctgtgtcttattgggggtctagagaagccctc
aagatggcagacggtcgtttaggccttacgcagcacaaaagcggtcaaaatggtcaaacc
ggtaatggtcaccatccttctggagcaaagaaaaatggtcgaagtaatcaaggtcgacct
ggtgcgagggtttctcacgagcatggatttgcaggagcaactggaaatggcggtcccaat
ccgcgtaatgctaggaattcaaaaaatacaaaaaatcgacctaagtctaactttaaaggt
cctaggccaaagaaatctagtgatttaggataa
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