Polynucleobacter sp. SHI2: PSHI2_14370
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Entry
PSHI2_14370 CDS
T10386
Name
(GenBank) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PSHI2_14370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
poly03019
]
PSHI2_14370
03009 Ribosome biogenesis [BR:
poly03009
]
PSHI2_14370
03036 Chromosome and associated proteins [BR:
poly03036
]
PSHI2_14370
Enzymes [BR:
poly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PSHI2_14370
Messenger RNA biogenesis [BR:
poly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PSHI2_14370
Ribosome biogenesis [BR:
poly03009
]
Eukaryotic type
90S particles
RNase
PSHI2_14370
Prokaryotic type
rRNA processing factors
PSHI2_14370
Chromosome and associated proteins [BR:
poly03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PSHI2_14370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BDW11355
LinkDB
All DBs
Position
complement(1470580..1471374)
Genome browser
AA seq
264 aa
AA seq
DB search
MNSRITIDTKLLQERLGYQFQKNDLLMQALTHRSHGKKNNERLEFLGDSVLNCIVAEILF
EKFTALDEGDLSRVRANLVKQQALYEIAQSLSLSDYLRLGEGELKSGGFKRPSILADTLE
AIIAAIFIEAGFDKVREVLRRLYAQILENVDPKTLGKDDKTLLQEYLQGHQLPLPVYQVT
ATTGVAHNQQFEVECLVESLNIQVSGAGASRRAAEQSAAKLALIAAQKALPQTGQAAKKQ
SSRKKKSILDPSSGDEQLNLTLRA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaattctcggatcaccattgacactaaacttctgcaggagcgcctgggctatcagttc
cagaaaaatgatttattaatgcaggcgttaacgcatcgcagtcatggtaaaaaaaataat
gaacgactggagtttttaggtgattctgttctgaactgtattgttgctgaaattttattt
gaaaaatttactgcgcttgatgaaggagatttatcacgtgtaagagctaatttagtcaag
caacaagccctttacgaaatcgcgcaaagtttatctctatctgattatttgcgactggga
gaaggtgagttaaaaagtggtggttttaaacggccttcgattttggcagacactttagag
gcaattattgcggctatttttattgaagctggatttgataaagtccgagaagtattgcga
cgcttgtatgcacaaattttagaaaatgttgatccaaaaacattaggcaaagatgataag
accttgttgcaagagtatttacaaggccatcaattaccactccccgtgtatcaagtgact
gcgacaactggagttgcccataatcaacaatttgaagttgagtgtttagtggagagttta
aatattcaggtatctggcgctggggcgagccgcagagctgcagaacagtcagcagctaaa
ttggctttaattgctgcacaaaaagccttgccacaaactgggcaagccgccaaaaaacaa
tcatcacggaagaaaaaaagcatcttagatccaagctcaggtgatgagcagttaaactta
accttgcgagcatag
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