Polynucleobacter sp. SHI2: PSHI2_14950
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Entry
PSHI2_14950 CDS
T10386
Symbol
lapB
Name
(GenBank) lipopolysaccharide assembly protein B
KO
K19804
lipopolysaccharide assembly protein B
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
PSHI2_14950 (lapB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_LapB
TPR_16
TPR_19
TPR_2
TPR_7
TPR_11
TPR_12
TPR_14
Cas12f1-like_TNB
TPR_9
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BDW11413
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Position
complement(1522718..1523911)
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AA seq
397 aa
AA seq
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MQVQMYWLLLIPILFGMGWLAARWEMRLQEYEDDVEQAKKERSTFKGINLLLNEQHDKAI
DALVEVAQLDPETTELHFALGSLFRRRGETERAIRVHQHLTSRQDIRPRDRAHASYELGR
DFLRAGMLDRAEASLNMVTEGKYILPAKVSLLEMYQIEKDWQKAIIAATELELLEEKSYK
EQIAHFYCEIAQEAMRSKDLLATKEAIDHALQAVPHHIRATILKGELAIVEQKPLDAIAT
WGYIEKHAPIFLHLIADKWIKAYAQMNKEEEGLTVLTQHLKEQGTGELLDLVFKNVLRLH
GPEKALELINQVMLDSASLTAMTKRFETEHLLAQSKDDALLIAQTKASLDLLKHRTNSLA
RYTCSNCGFRARRFYWQCPGCNHWDVYSPKRSEGLAT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccaaatgtattggttgttacttattccgattctttttggaatgggctggtta
gctgcacgttgggagatgcgtcttcaagagtatgaagacgatgtcgagcaagctaaaaaa
gagcgatctacatttaaaggtattaatttacttctcaatgagcagcatgataaagccatc
gatgctctagtcgaagtggcgcaattagatccagaaacaaccgagcttcattttgcttta
ggtagtttatttagaaggcgtggagaaactgagcgcgccatccgagtgcatcaacatctc
actagtcgacaagatatacggccgcgagatcgggctcatgcatcttatgagttaggtcga
gactttttgcgtgctggaatgctagaccgtgcagaagctagtttgaatatggtaacagaa
ggtaaatacatcttacccgctaaagtatcacttttagaaatgtatcaaattgaaaaggac
tggcaaaaagccattattgccgccactgagttagagcttctagaagagaaaagttataaa
gagcagatcgcgcatttttattgtgaaattgctcaagaagcgatgcgctctaaagattta
ctcgcaactaaagaggcgattgatcatgccttgcaagcagtgcctcatcatatcagagca
actattctcaaaggtgagttagcgattgttgagcaaaaacccttggatgcaattgctacg
tggggatatattgaaaaacatgcgccgatctttttacatttgattgcagataagtggatt
aaagcctatgcgcaaatgaataaagaagaagagggattaactgttttaacccagcattta
aaagagcagggcacgggtgaattattagatttagtatttaaaaatgttttacgtttacat
ggcccagaaaaagccttggagttgatcaatcaagtgatgttggactcagcaagtttgact
gcgatgaccaaacgctttgaaaccgagcatcttttagctcaaagcaaagacgatgctctg
ttgattgcgcaaacaaaagcatccttagatttactgaagcatcgcacgaatagtttggct
agatatacctgtagtaattgtggttttcgggctaggcgtttttattggcagtgtccaggc
tgtaatcactgggatgtatactcacctaaaagaagtgaaggcttggcaacttaa
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