Polynucleobacter sp. SHI2: PSHI2_15040
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Entry
PSHI2_15040 CDS
T10386
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
poly Polynucleobacter sp. SHI2
Brite
Enzymes [BR:
poly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PSHI2_15040 (gyrA)
DNA replication proteins [BR:
poly03032
]
Prokaryotic type
DNA Topoisomerases
PSHI2_15040 (gyrA)
DNA repair and recombination proteins [BR:
poly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSHI2_15040 (gyrA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDW11422
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Position
complement(1532614..1535274)
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AA seq
886 aa
AA seq
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MEQAAKETIPVSLEDEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLAKIAHELLADIEKETVDFGPNYDGSEQEPLILPAKIPNLLINGSSGIAVGMAT
NIPPHNIDEVISACIFLLENPECDIEELINLVPAPDFPTGGTIYGIQGVREGYRTGRGRV
IMRAKTHFEDMEKGQRQSIIVDELPYQVNKKNLLERIAELVIEKKVEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKNTQLQDNFGMNMVALVDNQPRLLNLKQLLECFLRHRRE
VVTRRTLFELKKARDRGHVLEGLAVALANIDEFIALIKAAPTPPEAKKELLSRTWDSSVV
REMLTRSAMETQGGTAAYRPDRLPANLGLQPDGLYRLSEDQAQEILQMRLQRLTGLEQDK
IVDEYKEVMAEISDLLDLLARPDRVTEVIRSELLDSKKEFGQEGSDNGRRSIIEMNATEL
FTEDLITPQDLVVTLSNTGYMKSQPLTEYKAQKRGGRGKSATTTKDEDWISTLFVANTHD
TILCFSDRGRLYWLKVWEVPAGSRTSRGKPIINMFPLQPNEKITTILPIKGYVENQYVFM
ATRFGVVKKSRLSDFSNPRKGGIIAVDLDEGDILVGAAITHGNEDVMLFSDAGKAVRFDE
NDVRPMGRTARGVRGMNLAQGQEVIAMLVAPNEAEAEIMAQAGNLPSVLTATENGYGKRT
SLSEYTRHGRGTKGMIAIQTTERNGKLVAASLVTEVDQIMLITTGGILVRTRVSEIREMG
RSTQGVTLINVDSGTVLSGLQRIAESEDDDIDDEDSAGDEVPTVSE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagccgctaaagaaacaatacccgtatcactagaagatgaaatgcggcggtcc
tatttggactacgcaatgagcgttatcgtaggacgcgccctcccagatgctagagatgga
ttaaaacccgtacatcgcagggtgctttttgccatgcatgagctcaacaatgactggaat
agggcatataagaagtctgcccgtattgtgggtgatgtgattggtaagtaccatccccat
ggtgacacagccgtatatgacacgattgttcgtatggcccaggacttctccttgcgctat
atgctcgtggatggtcaaggaaactttggctctgtagatggtgataacgctgctgcgatg
cgatataccgaaattcgtttggcaaagattgcccacgagttattggcggatattgagaaa
gaaactgtcgattttggcccaaactacgacggaagtgagcaagagccgttaattctgccg
gcaaaaatcccaaatttactcattaatggctcctcaggcattgccgtgggtatggcaacg
aacattcctcctcacaatattgatgaagttatcagtgcctgtatctttttgcttgaaaac
cctgagtgtgacatcgaggagttgattaatttagttcctgccccagattttccgacgggc
ggcacaatttatggaattcaaggcgttcgtgagggatatagaacgggtcgtggtcgagtc
attatgcgtgcaaaaacgcattttgaagatatggaaaaaggccaacgtcagtcgattatc
gttgatgagttgccataccaagttaataaaaagaaccttcttgagcgtattgcagagttg
gttattgagaaaaaagttgagggaatttccgatattcgcgacgaatccgataaatcgggt
atgcgggttgtaattgagcttaagcgcggtgaagtgcctgaggttgttctcaacaatctc
tataaaaatacccaattacaagataactttggtatgaatatggtggctttggttgataac
cagccccgtttactcaatttaaaacaattattggagtgttttttacgccaccgtcgtgaa
gtcgtgacaagaagaacactatttgaattaaaaaaagcccgtgatcgtggtcatgttttg
gaaggtttggcagttgcattagcgaatattgatgaatttatcgctttaatcaaggctgcc
ccaacccccccagaagcaaaaaaagagttgctttcaagaacttgggattcaagtgtcgtg
cgcgaaatgttaacccgttcggcgatggaaacacagggtggcactgctgcttatcgtcca
gatcgcttacccgccaatttaggtcttcaacctgacggtttatatcgattgtcagaagat
caagctcaagaaattctgcaaatgcgcttacagcgcttaacgggccttgagcaagacaag
attgtggatgaatataaagaagtcatggccgagatttctgacttacttgatttattagct
agacctgaccgtgttacggaagtaattcgttctgagctattagattcgaaaaaagaattc
ggtcaagaaggttcagataatggtcgtcgctccattatcgaaatgaatgctacagaactc
tttacagaagatctcattactccgcaagatcttgttgtgaccttatctaacacgggttac
atgaagagccagcctttgacggaatataaagctcaaaaacgtggtggtcgaggaaagtcc
gcaacaaccacaaaagatgaagattggatatcaacattatttgtagccaatacgcatgac
acgatactttgtttctctgatcgagggcgtctgtattggttaaaagtatgggaagtacct
gccggaagtagaacttcaagaggaaaaccgattatcaacatgttccctttacagccgaat
gaaaaaatcacaacgattttgccaattaaaggttatgtagagaatcaatatgtattcatg
gcaacacgctttggtgtcgttaaaaaatcacgtttaagtgatttctcaaatccacgtaaa
ggcggaattattgcggttgatttagatgaaggcgacattttggttggagctgccattacg
catggcaatgaagatgtgatgttattttctgatgcaggtaaagccgtacgctttgatgaa
aacgatgtaagaccaatgggaagaactgccaggggtgtgcgtggtatgaacttagcccaa
ggtcaagaggtgattgctatgttggttgcgccgaatgaagctgaggctgagataatggct
caagctggcaatttaccgagcgtattaactgctacagaaaatggttatggtaaacgaact
tctttgtctgaatacacacgacatggtcgtggtacgaaaggtatgattgccattcagacg
accgaaagaaatggcaagttagttgcagcttcactcgtgactgaggttgatcagattatg
ttgatcacaacaggcggtattttagtcagaactagagtttctgagattcgagaaatgggg
cgttcgacacaaggtgtcacccttatcaatgtagattcaggtacagtgttatctggatta
caaagaattgcagaaagtgaagatgacgatattgacgacgaagattctgctggtgacgaa
gtaccgacagttagtgaataa
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