Polynucleobacter sp. SHI2: PSHI2_16140
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Entry
PSHI2_16140 CDS
T10386
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PSHI2_16140 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poly03400
]
PSHI2_16140 (mutS)
DNA repair and recombination proteins [BR:
poly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PSHI2_16140 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_C
MutS_II
Rad17
Motif
Other DBs
NCBI-ProteinID:
BDW11532
LinkDB
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Position
1647554..1650193
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AA seq
879 aa
AA seq
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MQDSFAGHSPAMQQFLRIKAENPHALLFFRMGDFYELFFEDAQIAAKILDITLTQRGQSN
GSPIKMAGVPYHSAEQYLAKLIQAGQSVAICEQIGDPATSKGPVERKVMRILTPGTVTDK
ALLSERQNNTLLTLTMHHQQIGIAWLVMASGELKMAQFPRGDLPQYLARILPQEWLCQPE
QSLALQEMLQDIAYLEAPNTEQVPSWVWQTKDGAARLKDTLGIPDLSVIGIDENHPMELA
LQAVGVLLSFAAYTQGLGWSGKIPHLQSCQIEQGDLYIGMDAATRRNLELTQTLRGEPEP
TLYSLLDDCSSPMGSRLLRHWVHHPIRSQAEIKQRHEVVTQFLSNPFTFQELRAELKRIS
DIERIASRIALKSVRPKDLSSLRDTLSSLPEIRETLTELERDCILISALKNDLMVEEDML
DLLRRAVMEDPASVIREGGVIADGYHPDLDELRALSADTGQFLIDLETRERVRTGINTLR
VEFNKIHGFFIEVTHGQTDKVPLDYQRRQTLKNAERYITPELKAFEDKALSAKERSFALE
KQLFEELVQMLQKDIQTIQVIAKALAKIDVLASFASCAKTYEWHCPELVEQAVIEIQQGR
HPVVEAQLAKKSLSFSSNDAHLQSNRKMLMITGPNMGGKSTYMRQVALITVMAYIGSFVP
ASHAKLGPIDQIFTRIGAADDLASGKSTFMVEMTEAAGILHRATEHSLVLMDEIGRGTST
FDGLSLAWAIAKYLLEVNRSFTLFATHYLELAHLPSNYPQCVNVHLSAIEQGRELIFLHQ
VKPGHASQSYGLQVAQLAGVPKPIITQARKKLLQLEAQNDSHQIQNDLFAQPIEEFDQGA
ESVATEPHPVEFAIRELDPDSLSPKQALEALYELKKLLN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgcaagattcatttgctggtcattcacctgcgatgcaacagtttttgaggattaaagca
gaaaacccgcacgctcttttattctttcgaatgggtgatttttatgagctcttctttgaa
gatgcccaaattgctgcgaagatccttgatattaccctcacccaacgtggtcaatccaat
ggctctcccattaaaatggcgggagtcccctatcactctgctgaacaatatcttgccaaa
ttgattcaagcgggtcagagtgtggcgatttgcgaacaaatcggcgacccagcaacaagt
aaaggtccggttgaacgaaaggtcatgcgaattctaacgcccggcactgtaacagataaa
gcacttttatcggaacgtcaaaataataccctgctcaccttaacaatgcatcaccagcaa
attggtattgcttggttagtcatggcgagtggtgaattaaaaatggcgcaatttccaagg
ggtgatctaccgcaatatcttgcgcgtattttgccgcaagagtggctatgccaacctgaa
caaagtctagccttacaagaaatgttgcaagatattgcttatctggaagctccaaatacg
gagcaagtgccctcctgggtgtggcaaaccaaagatggtgctgcacgcttaaaggacaca
ctgggaatacctgatttatcagtgatcgggattgatgaaaatcatccaatggaactcgcc
ttacaagcagtcggcgttctcttgtcgttcgctgcttatacacaaggtttgggatggtcg
ggaaaaattccacatcttcagtcctgtcaaattgaacagggtgatctgtatattggtatg
gatgctgccacgcggagaaacctcgagttaacccaaacattaaggggcgaacctgaacct
actttgtattcattactcgacgattgctcaagtcccatggggagtcgcctgttacgtcac
tgggttcaccacccgattcgatctcaagccgagatcaaacagcgccatgaagtggtgaca
cagttcctgagcaacccttttacttttcaagaattacgcgctgaattaaaaagaatttct
gatattgagcgaattgcttctcgcattgccctcaaaagcgttcgtccgaaagatctctct
agcctacgtgatactctgagttctctgccggagattcgtgagaccttaacggaactggag
cgtgattgtattttaatcagtgcgttaaaaaatgatttaatggtcgaagaggatatgctt
gatctgttgcgtcgagcagtcatggaagatcctgcaagtgtgattcgagaaggtggtgtg
attgcggatggttaccatccagatttagatgagcttcgcgctttatcagcggatacgggt
caatttttaattgacctagaaacccgtgaacgcgtccgcacaggaataaatactttacgc
gttgaatttaataaaatccatggtttttttattgaagtgactcatggtcagacggataaa
gtgcctctagattatcaacgtcgccaaaccctcaaaaacgcggaacgctatatcacccca
gaattaaaagcttttgaagacaaagctctttccgcaaaagaacggagttttgctctagaa
aaacaattgtttgaagaattagtccaaatgctgcaaaaagatattcaaacgatacaggtc
atcgctaaagctcttgccaaaatcgatgttcttgcaagctttgccagttgtgctaaaacc
tatgaatggcattgtcctgagctcgttgagcaagcagttatcgaaatccaacaaggtcgt
catccagtggtggaagcacaattagccaaaaagtccttatcgttctctagtaatgatgcc
catttgcaaagcaatcggaaaatgttaatgattacgggtcctaatatgggtggtaaatcg
acctatatgcggcaagtagctttgataacggtgatggcttatatcggcagctttgtaccg
gcatcccatgcaaagctaggtccaattgatcaaatcttcaccagaattggtgcggcagat
gacctagcaagtggtaaatctacctttatggttgaaatgactgaggcggcaggtattttg
caccgagcgacggaacatagcctggtcttgatggatgaaatcggtcgtggtacttcgact
tttgatggcttatccctggcctgggcgattgccaaatacttgttagaggttaatcgcagc
tttactttatttgccacacattatttagaactggcgcatttgccgagtaactatccacaa
tgtgtcaatgtccatttatctgcgattgaacaaggtcgtgaactgatctttttacatcaa
gtcaaacctggtcatgcgagccaaagctacggcttgcaagtagctcaacttgcaggtgta
ccaaaacccatcattacgcaggcacgcaaaaaactactacaacttgaagcgcaaaatgat
agtcatcagatccaaaatgatctatttgctcaacccatagaggagtttgaccaaggtgca
gaatctgttgcaactgagcctcatccggtggaatttgcgatccgtgaacttgatccagat
tctttaagtcctaaacaagctttagaagccctctacgagctaaaaaaacttcttaattag
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