Polynucleobacter sp. SHI2: PSHI2_16750
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Entry
PSHI2_16750 CDS
T10386
Name
(GenBank) metal-dependent hydrolase
KO
K01995
branched-chain amino acid transport system ATP-binding protein
K01998
branched-chain amino acid transport system permease protein
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly02010
ABC transporters
poly02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSHI2_16750
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSHI2_16750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poly02000
]
PSHI2_16750
Transporters [BR:
poly02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
PSHI2_16750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
ABC_tran
BCA_ABC_TP_C
AAA_23
AAA_21
AAA_29
SMC_N
RsgA_GTPase
AAA_30
AAA_19
Rad17
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
BDW11593
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Position
complement(1709333..1711072)
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AA seq
579 aa
AA seq
DB search
MKQSSYGLVVLAGALFAMLPWLNMPAFWQSFLYIVFYWGVLAVSWNLFSGVSGYFSFGHG
AFFGIGMYTVAYFCGHLEIPFLPILIVAGFLAGLFGLGIGALVFRVHNVRGELFALLTLA
VTFVIATIVLNTPIDGGPGVYLNSVAIPKFGPNAAGTFYLMMLALLIITLLAAIWIYSSK
LGLGLSAIHDDEDAAEVMGVPTYRSKLVGLFISTYLAGMAGAIQALFVSYVTANETFSIT
VPLFVVLMSVLGGTRHWAGPLLGAIVITGIQYFFTVGDSALMGKMILGLILIAVILFIPN
GLLGNFARLRAKKNSQKIVETLKNTYIQSSTNEHHRPTSQVLLQTHALSKSFSGVKALQN
LDLEIYQGEILGLLGPNGSGKSTFINVISGHFAATGGQKIFQGEDITGLSAHEIAVKGIT
RTYQTPRPFNELTVLDNTRLVASYAGNTSLEEAGELAYAALTQVGLEHKADALPSDLNLH
QRKFLEFARALAAKPKLLMLDEVLSGLTPSEIQSSVELIQKIRSQGTTILFVEHVMSAVM
ALADRIAVLNHGQLIAKGLPTEVMRNPEVMAAYLGKKAE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatcaagttatggtttagttgttcttgctggtgcattatttgccatgttgcct
tggctcaatatgccagctttttggcaatcgtttttgtacattgttttttactggggtgta
ttggcagtttcatggaatttattttctggagtatcaggatatttttcatttggccatggc
gctttctttggtattggaatgtataccgtggcttatttttgtggtcatttggaaatacca
tttttaccgatactcattgtggcgggatttcttgcaggattatttggcttaggcatcggt
gctttagtctttagagttcacaatgtacgtggcgaactgtttgcccttttgacattggca
gtcacttttgtgattgctacgattgttctcaatactcccatagacggtggaccgggagtt
tatctaaattcagtagcaattcctaagtttggcccaaatgccgctgggactttttatctg
atgatgctggctttgttgatcataacgttgttagccgccatttggatttattcatctaag
ttaggcttaggactcagcgcgattcatgatgatgaagacgcagctgaagtgatgggtgtg
ccgacctatcgatctaaattagtaggattatttatttctacttatttagctggaatggca
ggggccattcaagccttatttgtgtcttatgtaacggcgaatgagaccttttcgattacc
gtgcctttatttgtggttttaatgagtgtcttaggtggtacacgccattgggccggacct
ctattaggcgctattgtgatcacaggaattcagtacttttttaccgttggtgatagtgct
ttaatgggtaagatgattttgggattgattttaattgcagttattttatttataccgaat
gggttgttaggcaactttgcacgattgcgagcaaagaaaaactcacagaaaattgtagaa
accttaaaaaatacctatatacagtcatctactaatgagcatcatcgccccacatctcag
gtgttattacaaacccacgccttgagtaaatcattcagtggagtgaaggcattacaaaat
ttagatctggaaatttatcagggagagattttaggtttacttggccccaatggttctgga
aaatccacctttattaatgtcatcagtggacattttgcggctactggtggtcaaaaaata
tttcaaggtgaggatattactggtcttagtgcacatgagatcgccgtcaaaggaattaca
agaacctatcaaacacctcgaccctttaatgaattaactgtcttggataacacacgactg
gttgcttcatacgctggcaatacctcattagaagaggctggtgaattagcctatgcggcc
ttaacgcaagtaggacttgagcataaagctgatgcattaccttcagacttaaatctgcat
caaagaaagtttttagagtttgcacgcgcattagcggcaaagccaaagttattgatgttg
gatgaggtgctttctgggctcacgcctagtgaaattcaaagttctgtggagcttattcaa
aagattcgaagtcaaggcacgactattttatttgtagaacatgtgatgtcagccgtcatg
gcattagctgaccgcattgccgtgctcaatcatgggcaactcattgctaagggactacca
actgaagtgatgcgaaacccagaagtgatggccgcatatttagggaaaaaggcagaataa
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