Polynucleobacter sp. SHI2: PSHI2_18680
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Entry
PSHI2_18680 CDS
T10386
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly02020
Two-component system
poly02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSHI2_18680 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PSHI2_18680 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poly03021
]
PSHI2_18680 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
poly02035
]
PSHI2_18680 (fliA)
Transcription machinery [BR:
poly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSHI2_18680 (fliA)
Bacterial motility proteins [BR:
poly02035
]
Flagellar system
Flagellar assembly proteins
Stator
PSHI2_18680 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
SLATT_5
UPF0147
Motif
Other DBs
NCBI-ProteinID:
BDW11786
LinkDB
All DBs
Position
1903318..1904055
Genome browser
AA seq
245 aa
AA seq
DB search
MYDAKGRADRDLVFKEHMHLVKKLAHQLKAKLPSNVEVDDLIQAGMIGLLDALSKYEETA
LAQFETYAVQRIRGAMLDQLRESDWMPRGIRKNMRKVEMVLNELQQELARPPTETEAAKK
MQLSLTEYQQILTDGAGHQLIYFDDFHDSDGDSADHFLDRFYSDTSQDPLQALINVGFRA
AVIKSIDNLPEREKLLMGLYYEQELNLKEIGAVMGITESRVSQLHSQAIARMRGILRAQK
WTGVA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatgctaaaggacgtgcagatcgtgatcttgtttttaaagaacacatgcatctc
gtgaaaaaattagcccatcaactcaaagcaaagcttccttctaatgtggaagttgatgac
ttgattcaagccggaatgattggtctattagatgctttatccaaatatgaagaaactgct
ttagctcagtttgaaacttatgcggtacagcgtatacgtggcgcaatgcttgatcaactc
cgtgaaagtgattggatgccacgcggtattcgcaaaaacatgcggaaagtggaaatggtt
cttaatgaacttcaacaagaattagctaggcctccaacagaaacagaagctgcaaaaaag
atgcaactctcgttaaccgaatatcaacaaatcttaactgatggcgcgggtcaccaactc
atttattttgatgattttcatgatagtgatggggatagtgcagaccacttcttagatcgt
ttttattctgatacctcccaagacccactccaagctttaatcaatgtgggctttagggcc
gcggtgattaaatccattgacaacttaccagaacgtgaaaaattactcatgggtctttat
tatgaacaagagctcaatttaaaagaaattggggctgtaatgggcattacggaatcacga
gtttcacaattacatagccaagccatcgcacggatgcgtggtattttgagggcccaaaag
tggactggggtagcttaa
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