Polynucleobacter sp. SHI2: PSHI2_19780
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Entry
PSHI2_19780 CDS
T10386
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly03030
DNA replication
poly03410
Base excision repair
poly03420
Nucleotide excision repair
poly03440
Homologous recombination
Brite
Enzymes [BR:
poly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHI2_19780 (polA)
DNA replication proteins [BR:
poly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PSHI2_19780 (polA)
DNA repair and recombination proteins [BR:
poly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PSHI2_19780 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSHI2_19780 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDW11896
LinkDB
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Position
complement(2016604..2019273)
Genome browser
AA seq
889 aa
AA seq
DB search
MPDLRNPKGEPTGAIYGMINMLRRLRTELPTSHIACVFDAKGPTFRDEWYPQYKANRSPM
PEDLVKQIEPIHAVVKALGWPVIMVSGVEADDVIGTLAKKATAVGWKTVISTGDKDLAQL
VDESVTLINTMTNEKLDIQGVIDKFGIAPHLIVDYLTIIGDTVDNVPGVPKAGPKTAVKW
LTEFGDLDSVIAQSDQIKGVVGENLRSSLEWLEQAKRLLTVKVDCELDEHLNDLSELQVQ
PENHEELKQLFIRYGFKTWLKEYEPNNQGFEQESAGSSQQNQLSFPSQPVITSYESVTSK
EQLTVWLDKIKSASLTCVDTETTGLDPMRSQLVGISLSVEAGKACYIPLKHMTNEDQLDR
EETLETLRPWLEDPQAPKLGQNLKFDWHILANHGITLRGIVHDTLLQSYVYESHRSHDMD
SLAQRHLGVKTITFEEVCGKGASQIGFDQVDIATATQYAAEDADITLRLHQHLWPMIESD
QPLCYVYQAIEIPTMLVLARMERNGILIDSAKLAQQGQVIGLRLLELEKEIHTLAGQPFN
IQSPKQIGEILFQVKNLPIIKKTPGGAPSTDEEVLQKLSENYPLPARILDYRSLAKLQST
YVEKLPRMADSKTGRVHTNYAQAVAATGRLASNEPNLQNIPVRTEEGRKIREAFIARPGW
QLISADYSQIELRIMAHIAQDANLLEAFAQGRDIHQATAAEIFGVPLEGVTPEQRRYAKV
INFGLIYGMSAFGLASNLGIERSAAQTYIDTYFGRYPGVAKYMADTRVLAKEKGYVETIF
GRRLWLPEINSSNGMRRQGAERAAINAPMQGTAADLIKLSMIAVQSWLEAQNLQTQMLLQ
VHDELVLEVPPAELELVKMNLRNLMTQVATLRVPLEVGIGVGTNWEEAH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatttgcgcaatcccaaaggagagccaacaggtgccatttatggcatgattaat
atgttacgccgattacgtactgagttaccaacttctcatatagcttgtgtttttgatgcc
aagggccctacatttagagatgaatggtaccctcaatataaagctaatcgttcgccaatg
ccagaggatttggttaagcaaattgagcctattcatgcagttgtaaaagctttgggttgg
cctgtaattatggtgtcaggtgtcgaagctgatgacgtcattggaactttggcgaaaaag
gccacagccgtgggttggaaaacagtgatttctacgggagacaaagatctcgcgcaatta
gtcgatgagtcagtcacgttgatcaataccatgactaacgaaaaactagatatacaaggc
gtgattgataaatttggcattgcgccacacttaatcgtcgattatctaacgattattggg
gacactgtggataatgttccaggcgttcccaaagcgggccctaagactgccgtgaaatgg
ttgactgagtttggtgatttagatagcgtgattgcacagtctgaccaaattaagggcgtc
gttggtgaaaatctcaggagttctcttgaatggttagagcaagccaagcgcttactgact
gtgaaagtagattgtgaactggatgagcacttaaatgatctttcagaattacaagttcaa
ccagaaaaccatgaggaattaaagcaattatttattcgttatggatttaaaacatggtta
aaagaatacgaaccaaataatcaaggttttgagcaagaaagtgcgggaagttctcagcaa
aatcaattatcttttccttctcaaccagttattacaagttatgaatcggttaccagtaaa
gagcaactgactgtttggcttgataaaataaaatctgcttctttaacttgcgtcgatacg
gaaacgactggattagatcctatgcgttctcaattagtagggatatctttatcagttgag
gcgggaaaggcatgctacataccactcaagcatatgacgaatgaagatcagttggatcgc
gaagagacacttgaaactttacgtccctggttggaggatcctcaagcacctaaactaggc
caaaacctcaaatttgattggcatatattggccaatcatggaattacgcttcgcggaatt
gtgcatgacaccttattacaatcgtatgtgtatgaatcacatcgctctcatgatatggat
agtttggcgcaacgtcatttaggggtgaagacaatcacatttgaagaggtttgcggcaaa
ggagcgtcacagattgggtttgatcaggtcgatatcgctaccgcaacgcaatatgccgca
gaggatgccgatattacgttacgactccatcaacatttatggcccatgatagagtcagat
caaccattatgttatgtctatcaagccattgaaataccaacgatgttggtccttgcacgt
atggagcgtaatggcattttgattgattctgcaaaattagcccaacaaggacaggtcatc
ggcctgcgactattggagttagaaaaagaaatccatactttggcgggacaaccttttaat
attcaatcgccaaaacaaattggtgaaattctctttcaagttaaaaatttacccattatt
aaaaaaactcctggcggggcaccctctacagatgaagaagtattgcaaaaattatcagag
aattatcctttgcccgcgcggattttggattatcgatcgttagcaaaattacaatcaact
tatgttgaaaaattaccaagaatggctgacagtaaaacgggtagagtccacactaattat
gctcaagcagttgcagcgacaggtcgattagcctctaatgaacctaacttacagaatatt
ccagtacgtactgaagagggtagaaaaattagagaagcatttattgctagacctggatgg
cagttgatttctgcagattactctcaaattgaattaaggatcatggcgcatattgcccaa
gatgctaatttactggaagcttttgcgcaggggcgagatatccaccaggcaaccgcagct
gagatttttggcgttccgcttgagggggtgacccctgagcagcgacgttatgccaaagtt
attaattttggcttaatttatggcatgagtgcttttggtttagctagcaatttgggaatt
gagcgttccgcagctcaaacgtatattgacacctattttgggcgttatcccggagttgct
aagtacatggctgatacccgtgttttagcgaaagaaaaaggctatgttgaaaccattttt
ggaagaagattatggctccctgaaattaatagctctaatggtatgagacgccaaggagct
gaacgtgctgcgattaatgctcctatgcagggcactgctgcagatttaataaagctctct
atgattgcagtccaatcctggctagaagcccaaaacttacaaacgcaaatgctcttacag
gttcacgatgaattggttctagaggttccgccagccgagctagagctcgttaaaatgaat
cttagaaacttaatgacacaagtagcaactttaagagttcctcttgaagttggaatcggt
gttggcaccaactgggaagaggcgcactag
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