Polynucleobacter sp. SHI2: PSHI2_20150
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Entry
PSHI2_20150 CDS
T10386
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00020
Citrate cycle (TCA cycle)
poly00480
Glutathione metabolism
poly00720
Other carbon fixation pathways
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
poly01120
Microbial metabolism in diverse environments
poly01200
Carbon metabolism
poly01210
2-Oxocarboxylic acid metabolism
poly01230
Biosynthesis of amino acids
poly04146
Peroxisome
Module
poly_M00009
Citrate cycle (TCA cycle, Krebs cycle)
poly_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSHI2_20150 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
PSHI2_20150 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PSHI2_20150 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSHI2_20150 (icd)
Enzymes [BR:
poly01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PSHI2_20150 (icd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
BDW11933
LinkDB
All DBs
Position
complement(2059271..2060521)
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AA seq
416 aa
AA seq
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MYKHIQVPAGEQITVNADFSINVPDNPIIPYIEGDGTGFDITPVMIKVVDAAVEKAYGGK
KKISWMEVFAGEKATKIYGPDVWLPEETLDAVKKYVVSIKGPLTTPVGGGIRSLNVALRQ
ELDLYVCLRPVRYFKGTPSPVKEPEKTNMVIFRENSEDIYAGIEWMSGTDGAKKVIDFLV
KEMGVKKIRFPDTSSIGIKPVSKEGTFRLVRKAIQYAIDNDKPSMTLVHKGNIMKFTEGG
FRDWGYEIAQKEFGAELIDGGPWCKMKNPKTGKEIIIKDVIADAFLQQILLRPNEYSVIA
TLNLNGDYVSDALAAQVGGIGIAPGANLSDTIAMFEATHGTAPKYAGKDYVNPGSEILSA
EMMLRHMGWFEAADAIIHSMEKSILSKKVTYDFARLMEGATQVSCSGFGQVMIDNM
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtataagcatattcaggttccagccggcgaacaaattaccgttaatgcagatttttct
attaatgtacctgacaatccaattattccttatattgagggagatggaactggctttgac
attactcctgtgatgattaaggttgttgatgctgctgttgaaaaagcatacggcggcaaa
aagaagatttcatggatggaagttttcgcaggtgaaaaagctaccaaaatttatggtcca
gatgtatggcttccagaggaaacattagacgctgttaaaaaatatgttgtgtcgattaaa
ggcccattaaccactccagttggtggtggtattcgttcattgaacgtagcacttcgtcaa
gagttggatctttatgtttgtttacgtccagtacgttatttcaaaggcacaccttcacca
gttaaagagccagaaaaaaccaacatggtgattttccgtgaaaactcagaagatatctat
gctggtattgagtggatgtccggcactgatggcgcaaagaaagtcattgattttctcgtc
aaagaaatgggcgttaagaagattcgtttcccagatacttcgtctattggtattaagcct
gtttcaaaagaaggcactttccgtttagtgcgtaaagccattcagtatgcaattgacaat
gacaagccttctatgactttagttcacaaaggtaacatcatgaaatttaccgaaggtgga
ttccgtgactggggttatgaaattgcccaaaaagagtttggcgctgaactgattgatggt
ggcccatggtgcaagatgaagaatccgaagactggtaaggaaattatcatcaaggacgtt
attgctgatgcattcttacaacaaatccttttacgtccaaatgaatatagcgtcattgca
accctcaacttaaatggcgactatgtatctgatgctttagctgctcaagttggcggaatt
ggtattgcaccaggtgcaaacttatcagatacgattgccatgtttgaagctacccatggt
actgcaccgaaatatgccggtaaggattatgtaaatccaggatctgagattctttccgca
gaaatgatgttgcgtcatatgggttggtttgaagctgctgacgcaattattcactcaatg
gaaaaatctattctttccaagaaagttacttatgactttgctcgcttaatggaaggcgct
acacaagtgtcatgctcaggctttggccaagtcatgattgataatatgtaa
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