Polynucleobacter sp. SHI2: PSHI2_21280
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Entry
PSHI2_21280 CDS
T10386
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poly03000
]
PSHI2_21280
Transcription factors [BR:
poly03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSHI2_21280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
WHD_NWD1
Motif
Other DBs
NCBI-ProteinID:
BDW12046
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Position
2180336..2181214
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AA seq
292 aa
AA seq
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MNNSYNYRHLYYFWVVAKEGGMSKAAERLNIATQTISTQVHELEKSLGYLLFKPAGRGII
LTDSGLLALEIADQIFSIGEKLPEALRDASKSPKTKIIVGISDSLPKFVARQLLDPVLKH
KDVQLIAHEGEFDKLLADLVLHRIDIILADRPASNNKNINVYSEELAKTSIAWYSPKQFL
KMAQNDFPDCLRELPILLPTSHSIVRLLMDQWFSKLDITPNIIGEFQDSALLKTFAASGM
GVFPAGKLIEKDLKETYGIELIGHCNDIYEYFYAIRSEKKIQHPLVQAIIEQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaataattcctacaactatcgtcacctatactatttttgggttgtggctaaagaaggc
ggcatgtctaaagcggcggagcgcctcaatatcgccacgcaaaccattagcactcaagtt
catgagttagaaaaatcccttggatacttattatttaaacctgcagggcggggtattatc
ctcacagattctggtttgctagccctagaaattgcagatcaaattttctcgattggtgag
aaattacctgaggctttgagggatgcttcaaaatctccgaaaacaaaaattattgttggt
atttctgatagcttacccaagtttgttgcaagacagttattagatccggttttaaaacac
aaagatgtccaactgattgcgcatgagggggagtttgataagttattagcggacttggta
cttcatcgtatagatattattttggcagaccgccctgcttccaacaacaagaatatcaac
gtttatagcgaagaactagccaaaacttccattgcttggtatagcccaaagcaattttta
aaaatggctcaaaacgattttcctgactgtcttcgtgagcttcccattctgcttccgaca
tcacattccatcgttcgcttattaatggatcagtggtttagtaagctcgatatcacacca
aatattattggagaatttcaggatagtgctcttcttaaaacctttgccgctagtggcatg
ggagtgtttccagctggaaaactcattgagaaagatcttaaagaaacttacggaattgaa
ttaataggtcattgtaatgacatctatgagtacttttatgccattcgatcagagaagaag
attcaacacccattggttcaagctattattgaacaatag
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