Polynucleobacter sp. SHI2: PSHI2_21500
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Entry
PSHI2_21500 CDS
T10386
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poly03016
]
PSHI2_21500 (miaB)
Enzymes [BR:
poly01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PSHI2_21500 (miaB)
Transfer RNA biogenesis [BR:
poly03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PSHI2_21500 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
SSV1_D-63
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BDW12068
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All DBs
Position
2195436..2196797
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AA seq
453 aa
AA seq
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MKKVFIKTFGCQMNEYDSEKMADVLEAADHYTETNIIEEADLILLNTCSIREKAQDKVFS
DLGRLRDMKAEKPGLLIGVGGCVASQEGQQIVSRAPYVDLVFGPQTLHRLPAMLKERHRS
GRSQVDISFPEIEKFDHLPLAKKSGGAAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLEDV
LVEVSTLAQQGVCEITLLGQNVNAYLGKIEGSDELADFALLLEYISEIPGVQRIRYTTSH
PKEFTQRLIEAHARLPKLVNHLHLPVQHGSDRILMAMKRGYTVLEYKSIIRKMRKVKPNI
PVSSDFIVGFPGETDEDFNELLSLVDEIKFDNSYCFIFSPRPGTPAANLKETVSREVSVK
RLQMLTSLIDEHILAISKSMIGNTELVMIEGMARDGLKLQGRTENNRVVNIDLPKNHQAQ
RLIGKMLSVHFTDALAHSLKGELILKNSDDFSN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtatttattaaaacctttggttgtcaaatgaacgagtatgactcggaaaag
atggccgatgtccttgaagcggctgatcattacaccgaaaccaacatcattgaggaagcg
gatttaattcttcttaacacgtgctctattcgagaaaaagcacaagataaggtgttttct
gacttagggcgcttgcgggacatgaaagctgaaaaacctggtctgctgattggggttggt
ggttgtgttgcgagtcaggaaggtcaacaaattgttagtcgtgcgccttatgttgattta
gtctttggtccccaaaccttacatcgattacctgcaatgcttaaagagcgtcatcgctca
gggcgctctcaggtggatatcagtttccctgaaatagaaaaatttgatcatcttccgcta
gccaagaaaagcggtggtgcagcctttgtttctattatggaaggttgttcaaaatactgt
acttactgtgttgttccctatacgcgtggcgaagaagtttcaaggcctcttgaagacgtt
cttgttgaggtttctacattagctcaacaaggagtttgtgaaattacacttttgggacag
aatgtgaatgcctatttaggaaagatcgagggaagtgatgaattggcagacttcgcttta
ttattagagtacatttctgaaattccgggagttcagcgaattcgttatacaacgagtcat
cctaaagaatttacgcaacgtttaatcgaggctcatgctcggctacccaaattagtgaac
catcttcatttgcctgttcagcatggctctgaccgaattttaatggcgatgaagaggggt
tatacggtgttggagtacaagagcattattcgtaaaatgcgaaaagtaaaaccaaacatt
ccagtatcaagtgattttattgttggatttccaggggaaacagatgaggactttaatgaa
ttactttcattggttgatgaaatcaaattcgacaacagttattgtttcattttcagtcct
aggcctggaactcccgcagcaaatttaaaagaaacggtttcaagagaggttagtgtgaag
cgtctacaaatgcttacctcactcattgatgagcatattttggcaatcagcaaaagtatg
attggcaatactgaattggtgatgattgaaggtatggctcgagatggtctaaagttgcaa
ggtcgaaccgaaaataatcgtgttgtaaatattgatttacctaaaaatcatcaagcccaa
agactgattggaaaaatgttatcggtacactttaccgatgcattagctcactccttaaaa
ggtgaacttattttaaaaaatagtgatgacttctcaaattaa
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