Polynucleobacter sp. SHI2: PSHI2_21700
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Entry
PSHI2_21700 CDS
T10386
Symbol
ruvA
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSHI2_21700 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poly03400
]
PSHI2_21700 (ruvA)
DNA repair and recombination proteins [BR:
poly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSHI2_21700 (ruvA)
RecFOR pathway proteins
PSHI2_21700 (ruvA)
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
Transposase_20
5_3_exonuc
IMS_HHH
HHH_8
UBA
MarB
Motif
Other DBs
NCBI-ProteinID:
BDW12088
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All DBs
Position
2217472..2218053
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AA seq
193 aa
AA seq
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MIGRIKGVLVQKSPPRILVDCQGVGYDIDVPMSTLYQLPENGSIVTLLTHHLVREDAQQL
YGFATESEREAFRTLIKISGVGARTALTILSGMSVADIAQAVTLQDSSRLMTVPGIGKKT
AERLLLELKGKFGADLPHLSDSNLTAPASSEILQALIALGYSDKEAVLALKQVPSDANVS
DGIRLALKTLSKA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgataggcagaattaaaggtgtactagtgcagaaaagtcctcctcgaatcttggtcgat
tgtcagggggttggttacgatattgatgtgcctatgagcacgctgtatcaacttccagaa
aatggttccattgttactttgctgacccatcatttggtgagggaagatgcgcaacaactc
tatggatttgcaactgaatctgaaagagaagcttttcggaccttaatcaaaattagtggg
gtaggtgcgcgtaccgcactcacgattctttcaggaatgagtgttgctgatattgcacag
gctgtgacactgcaagactcctcaagacttatgacggtgccaggtatcggtaaaaaaact
gctgaaagacttcttttagagcttaaaggaaaatttggggcagatttgccccatttgtca
gattcaaatctgactgcccctgcttcctcagaaatcctacaagctttaattgctttgggc
tattctgataaagaagctgttttagctctcaagcaggttccaagtgatgccaatgtttca
gatggtatccgtttagccttaaaaacactctcaaaagcatag
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