Polynucleobacter sp. SHI2: PSHI2_21820
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Entry
PSHI2_21820 CDS
T10386
Name
(GenBank) metal ABC transporter permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PSHI2_21820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poly02000
]
PSHI2_21820
Transporters [BR:
poly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PSHI2_21820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_29
AAA_25
AAA_16
ABC_ATPase
Zeta_toxin
DEAD
DUF8000
nSTAND3
DUF3654
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
BDW12100
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Position
complement(2228217..2230043)
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AA seq
608 aa
AA seq
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MRPSAADHSPRSSKPRGLGDWGTIKTLIPYLTKYPWRVFFAISCLVLAKVANIGIPVVLK
HLIDDLSIAVDDPRRFLVFPLAFVIAYGLLRLSASLFTELREFLFAKVTQNAIRQVAIEV
FNHLHSLSLRFHLGRQTGGVSRDIDRGSRGIQSLISYSLYSILPTLIEFTIVLIYLAINY
DWLYAAITFCALVIYIIFTVMVTEWRSKYRRKMNEMDTSANQKAIDSLLNFETVKYFSNE
KFEAHRYDSFLQSYQKAAVKSQQSLAVLNIGQQSIIVIGLIAILWRATLGVQSGELTLGD
IVLINTLMIQMYIPLNFLGVIYREIKQSILDMDNMFSLLNKDQEIKDAPGAPALKLNHPN
LGPRVVFDQVNFSYEANRAILKNVSFVIEPGTTTAVVGSSGAGKSTLSRLLFRFYDVQSG
AIYFDEQNISAVQQLSLRKIVGIVPQDTVLFNDSIGYNIAYGNPQATQEEIIQAAQAAQI
HQFVMGLPEAYKTSVGERGLKLSGGEKQRVAIARTLLKNPALIIFDEATSALDSQTEKAI
QEEINKLTTNRTALIIAHRLSTIVHAQQILVMQDGEIVERGTHEELMSLQSKYATMWNLQ
KNQSEVSV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccatcagcagctgaccactctcctagatcttcaaaaccaagaggtcttggagat
tggggcactattaaaactttaataccctatttaaccaaatatccttggagagtatttttt
gcaatttcctgcttagttttagcaaaagttgccaacattgggatacctgtcgtattaaag
catcttatagatgatttatccattgcggtagatgatccaaggcgatttcttgtattccca
ttggcatttgttattgcttatggtctgcttagactgtcagcctcattatttactgaatta
agagaatttttatttgctaaagtgacgcaaaatgcgattcgtcaggtagctattgaagtc
ttcaaccatttacactcattgtctttgcgctttcatttagggcgtcaaactggtggagtt
tcgagagacattgatcgtggctcaagaggaattcaatccctcatttcatactctttgtat
agtattttgccaacactcattgaatttacgattgtgttgatataccttgccatcaattac
gattggctttatgcggcaattactttttgtgcattggtcatttatattatttttaccgtc
atggttacagaatggcgttctaagtatcgacgtaagatgaatgaaatggatactagtgct
aatcaaaaagcgatcgattctttattaaattttgaaaccgtaaaatattttagtaatgaa
aaatttgaggcacatcgttacgatagtttcttacaaagctatcaaaaagcagccgtcaaa
tcacaacaatctctagctgttttaaatattggtcaacaatcaattattgtgattggctta
atcgctatattatggcgagccacattaggggttcaaagcggtgagttgactttgggcgac
attgttttaataaataccttaatgattcaaatgtacatcccattaaattttttaggggtc
atttatcgagaaatcaaacaatccattttagatatggataatatgtttagtttgttaaat
aaagatcaagaaatcaaagatgcgccaggggcgcctgctttaaaactcaatcaccccaat
ttagggccacgtgtagtgtttgatcaagttaatttttcttacgaagcaaatcgcgccata
cttaaaaatgttagtttcgtcattgaacccggcacaacgactgcggtagtcgggagtagt
ggggctggtaaaagtactttatctagactgctattccgattttatgatgtccaatcgggg
gcaatctattttgatgaacaaaatatctctgctgtccagcaactaagtttaagaaaaata
gtaggtattgttccgcaagataccgttttgtttaatgattccataggctacaacatagcc
tatggaaacccacaagccactcaagaagaaatcatacaagcagctcaagccgcgcaaatc
caccaatttgtgatgggattaccagaggcttataaaacctctgtaggtgaacgaggtttg
aaactctcaggaggtgaaaaacaacgtgtagcaatcgcacgaactttattaaaaaatcca
gcgctgattatttttgatgaggcaacatctgcactagactctcaaacagaaaaagctatt
caagaagaaatcaacaaattaactaccaatagaactgctttgattattgcccatcgttta
tcaacgattgtgcatgcacagcagatattggtcatgcaagatggtgaaattgtggaacgt
ggaacgcatgaagaactcatgtcattacaatcgaaatatgcaacgatgtggaatttgcaa
aaaaatcaaagcgaagtctccgtctaa
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