KEGG   Polynucleobacter sp. SHI2: PSHI2_22070
Entry
PSHI2_22070       CDS       T10386                                 
Name
(GenBank) nucleotide-binding protein
  KO
K06958  RNase adapter protein RapZ
Organism
poly  Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:poly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:poly03019]
    PSHI2_22070
Messenger RNA biogenesis [BR:poly03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PSHI2_22070
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_28 AAA_22 AAA_16 Tsp45I AAA_23 AAA_29 Zeta_toxin SKI
Other DBs
NCBI-ProteinID: BDW12125
LinkDB
Position
2257262..2258164
AA seq 300 aa
MHIYIISGTSGSGKSVVIRALEDAGFNCIDNLPVNLLENLIQGLDPINNNLVAVAIDGRQ
GDSIHNLPSIIAKLKANYEITVLFLDASTTTLVNRFSETRRRHPLSIKANNQSEYSLIES
INFERELLSSINNIGHHIDTTNLSSNTLRNWVKDLVQENVQGLTLLFESFGYKHGIPQDI
DLIFDMRCIPNPYYENALRHLTGNDDPVKEFLNIQAEFKDLKKDIYDFLCRWIPKYQIDG
RSYLTIGIGCTGGQHRSVAMVNDLHQACLKSSEKMFQSMTILKRHRELNRHSQVVSQEHK
NT seq 903 nt   +upstreamnt  +downstreamnt
atgcacatatatattatttcaggaacctcagggtcaggtaaatctgttgttattcgcgct
ttagaggacgcaggttttaattgcattgataacttacctgtcaatcttcttgaaaattta
atacaaggcctagatccaataaacaataatttagttgcggttgctattgatggcagacaa
ggtgactcgattcataatttaccgtccatcatcgctaagttaaaagcaaattatgagata
accgttttatttttagatgcctcaacaacaactttagtcaatcgcttctcagaaaccaga
aggcgacaccccttatcgataaaagccaataatcaatctgaatactccttaattgaatcc
attaatttcgagcgcgaattactatcgagcattaataacattgggcatcatattgataca
actaatttatcctcaaatactcttagaaactgggtaaaggatttagtgcaagaaaatgtt
caaggtcttacactcttgtttgaatcttttggttataagcatgggatccctcaggatatt
gatcttatttttgatatgcgctgcattccaaatccttactatgaaaatgcacttcgccat
ttaactggcaatgatgatccagtaaaagaatttcttaatatacaggcagaatttaaagat
ctaaaaaaagatatttatgacttcctttgtcgttggatacctaaatatcaaattgatggt
cgtagctatttaacgattggcattggctgtacaggaggtcaacaccgatctgtggcaatg
gtgaatgaccttcatcaagcatgtttaaaaagctcagaaaaaatgtttcaatcgatgacg
attctgaagcgacatcgtgaattgaatcgacattcacaagtggtatctcaagagcacaaa
tag

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