Polynucleobacter sp. SHI2: PSHI2_22240
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Entry
PSHI2_22240 CDS
T10386
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poly03021
]
PSHI2_22240 (rpoH)
Transcription machinery [BR:
poly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSHI2_22240 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
DUF733
Motif
Other DBs
NCBI-ProteinID:
BDW12142
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All DBs
Position
2274193..2275104
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AA seq
303 aa
AA seq
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MSKLTVPATTAKISNGVIPLMPTLPQGGVGNLDAYISAVNQMPMLTAAEEIQLAKDLSEK
NDLEAARRLVLSHLRVVVSVSRQYLGYGLPHADLIQEGNIGLMKAVKKFDLSQGTRLVSY
AIYWIKAEIHEFILKNWRLVRVATTKPQRKLFFNLRSNKPHLNAMSDDEINALAKALDVK
ADDVRHMEIRLGGHDVQLEPDHDEDSPKEIGAWMSDSSLEPTEVLSRKEALELETSGLDS
ALHVLDERSERIINARWLSASSGKAPLTLHELAAEFNISAERVRQIETAALKKMREHLNQ
VKN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattaactgttccagctacaacagccaaaatatccaatggggttattccgttg
atgcctacccttccacagggcggggttgggaatttggatgcttacatttctgcagttaac
caaatgccaatgttaactgcagcggaagagattcagctagcaaaagatctttctgaaaaa
aatgacttagaggccgctcgtagacttgttctgagccatcttcgtgtagtggtttctgtt
tctcgtcagtatttaggctatggattaccgcacgctgatctgattcaggagggtaatatt
ggtttgatgaaggcggtgaaaaagtttgacttgtctcaaggcacacgcttagtgtcttat
gctatctattggattaaagctgagattcatgagttcattcttaaaaactggcgcctagta
agagttgcaacgactaaacctcaacgtaaactttttttcaatttaagaagtaataaacct
catttaaatgcaatgtcagatgacgagattaatgcattggctaaagctttagatgtcaaa
gcggatgatgttcgccatatggaaattcgtttaggtgggcatgatgtgcaactagaaccc
gatcatgacgaggactcaccaaaagaaattggtgcttggatgtcagattctagccttgaa
ccaaccgaggtgctttctcggaaggaagcgctagaattggaaacctcaggacttgactca
gcattgcatgttttagatgaaagaagcgagcggattatcaatgccagatggctgtctgcc
tcttcaggtaaagctcctttaacgcttcatgaattagctgcagagtttaatatttcagct
gagcgtgttcgtcaaattgaaactgccgctctcaaaaaaatgcgtgaacacctgaaccag
gtaaagaattaa
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