Polynucleobacter sp. SHI2: PSHI2_22260
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Entry
PSHI2_22260 CDS
T10386
Symbol
ctaB
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
poly Polynucleobacter sp. SHI2
Pathway
poly00190
Oxidative phosphorylation
poly00860
Porphyrin metabolism
poly01100
Metabolic pathways
poly01110
Biosynthesis of secondary metabolites
poly01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
PSHI2_22260 (ctaB)
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PSHI2_22260 (ctaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
poly01006
]
PSHI2_22260 (ctaB)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
poly03029
]
PSHI2_22260 (ctaB)
Enzymes [BR:
poly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
PSHI2_22260 (ctaB)
Prenyltransferases [BR:
poly01006
]
Compound prenylation
Protoheme farnesyltransferase
PSHI2_22260 (ctaB)
Mitochondrial biogenesis [BR:
poly03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
PSHI2_22260 (ctaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
SpoIIM
Motif
Other DBs
NCBI-ProteinID:
BDW12144
LinkDB
All DBs
Position
complement(2275696..2276574)
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AA seq
292 aa
AA seq
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MTKHTLPKTKWRQLYALTKPRVTQLAVFCAIIGMFLATPGMVPWPILIGGSFGILLLASA
AFAVNCLIEQKVDAKMKRTAWRASATGEATTSEILILSAVLGVIGSIMLWVFANPLTMWL
TILTFVGYAIIYTWFLKPATSQNIVIGGLSGAMPPALGWAAVANDVPPEAWLLVLIIFVW
TPPHFWALALYRREDYQNSELPMLPNTHGEQYTLLHIVLYTLIMFAASILPYVYGMSGLL
YLLSAIILGGIFLAYSVKLYFHYSDALAKKTFKYSIWYLSLLFVALLIDHYV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacatactttaccgaaaacaaaatggcgccaattgtatgccttgactaaacct
cgagtaactcaattggctgttttttgtgcaattattggaatgtttttggctactcccgga
atggttccttggccaatactgattggtggttcttttggaattttgttattggcgagtgct
gcatttgcagttaactgcttaattgagcaaaaagtggatgccaaaatgaaaagaactgct
tggcgcgcatccgcaacaggagaggcaaccacatctgaaatcctaattctatctgcagtt
ttaggtgtgattggatcaatcatgttgtgggtttttgctaatcctttaacgatgtggtta
accatcttgacctttgttggatacgccattatttatacgtggtttttaaagccagcaact
tcgcaaaatatcgtgattggtggtttatctggagcaatgcctcctgcccttggatgggca
gctgtagcgaatgatgtgcctcccgaggcatggttattagtgttaattatttttgtttgg
acaccgcctcatttttgggctcttgccctatatcgtcgtgaggattaccaaaactccgaa
ttgcctatgttgcccaatacccatggcgaacaatatacgttattacacattgttttatat
actttaattatgtttgctgcttcgattttgccttatgtttatggcatgagtggtttactt
tatttactcagtgcaattattcttggcggaatatttttagcttactctgtaaagctttat
tttcattattcagatgcattagccaaaaaaacattcaaatactctatttggtatttgtca
ttattatttgtggccttattgattgatcattatgtttaa
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