Polynucleobacter sp. SHI2: PSHI2_23130
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Entry
PSHI2_23130 CDS
T10386
Symbol
xerC
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
poly03036
]
PSHI2_23130 (xerC)
Chromosome and associated proteins [BR:
poly03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PSHI2_23130 (xerC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
EHN
Motif
Other DBs
NCBI-ProteinID:
BDW12231
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Position
complement(2356033..2357025)
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AA seq
330 aa
AA seq
DB search
MQGTTTRELLAVEQFIEELRVVRQLSPHTLKAYRQDLMILCQNISEEHLELHQVKSIHTR
SWVAKLHSQGSSPRSISRLLSAWRTFFDWLATSKTQAPIHEIKVNPVQDLRAPRKAKSLP
KALSVEYAIVLMEKAQQEASQPSNEQWSLLRDHALVELFYSSGLRLSEILGIDSSMTKGY
SKDSFGWIAWDSQEVHVLGKGGKRRIVPIGSSAMQALRTWFDAWAIKMAEQAKSAGPLFM
NQKAQRLSPRTVQERLKNLAMRSGLPVHVHPHMLRHSFASHVLQSSHDLRAVQEMLGHAS
IGSTQIYTALDFQHLAQAYDLAHPRSKASK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcacaaccactagggaactccttgcggttgaacaattcattgaagagcttagg
gtcgttagacaactatctccccataccctcaaagcttatcgtcaagatttaatgattctt
tgtcaaaacatatccgaagagcatctggagttacatcaagtaaagagtattcatacaaga
tcttgggttgcaaaacttcatagtcaaggatcttcacctagatccatctcgcgacttctt
tctgcttggagaacctttttcgattggctagctacaagtaagactcaggcacctattcat
gagataaaggtaaatcctgttcaagatctgcgagccccaagaaaagcgaagagcctacct
aaagccttgagtgttgaatacgctattgttttaatggaaaaggctcagcaagaagcaagt
caaccctcaaatgaacaatggtctttgttgcgagatcatgccttagttgagttgttttat
tcatcgggattgcgcttatctgaaattcttggaattgatagttccatgacaaaagggtat
tcgaaagattcttttggatggatagcttgggatagtcaagaagttcatgtgttgggtaaa
ggtggaaaacgtcggattgttcctatcggatcgtcagcaatgcaggctcttagaacttgg
tttgatgcatgggcaataaaaatggcggaacaagcgaagagtgcaggccctctatttatg
aatcaaaaagcccaaagactttcgccaaggactgttcaagagcgtttaaaaaatcttgcc
atgaggtcaggattaccagtccatgttcatccacatatgttgcgacacagttttgcaagt
catgtattacagtcatctcatgatctaagggccgttcaagaaatgcttggacacgccagc
attgggagtactcagatttatactgccctagattttcaacatttagcgcaagcatatgac
ttagcgcatccaaggtcaaaggcaagtaaataa
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