Polynucleobacter sp. SHI2: PSHI2_24320
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Entry
PSHI2_24320 CDS
T10386
Symbol
sun
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
poly Polynucleobacter sp. SHI2
Brite
KEGG Orthology (KO) [BR:
poly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
poly03009
]
PSHI2_24320 (sun)
Enzymes [BR:
poly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
PSHI2_24320 (sun)
Ribosome biogenesis [BR:
poly03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PSHI2_24320 (sun)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
CTD11
Sorting_nexin
DUF6261
Motif
Other DBs
NCBI-ProteinID:
BDW12350
LinkDB
All DBs
Position
complement(2466544..2467854)
Genome browser
AA seq
436 aa
AA seq
DB search
MQSKITETTIKLTHKAAGSNLCETILLSAHLLDQVREGISLTQALESPPSENRSAAQSLT
FEALRNKPKILQALKQFLHKEIDPEVEDLFVIAISTLLKESQNQYTAYTLVNETVNAAQK
SLKTRHAKGLINAVLRRVIENPQALEIDVLEAQYPSWWVKHLKRAYPAQLAPILEANLKP
AKMFLRVNSKKISKLEYISLLNDADIPILEIPQKWQKVAPYAIALQNSMPVQLLPGFKEG
LLSVQDLGAQIAAYLISPVNEEYILDACSAPGGKASHLLELANINLDVLEIDEDRMQRVQ
ENLSRLQLQANLLIGDATHASSWWSGKYYDAILADVPCSATGIIRRHPDILYLRRSADIS
QLQDLQRKIIVELWELLKPGGRLVFVTCSIFPQEGQLQLEWFAENLKDALRLECLGQLLP
DEWHDGFYYGMLQKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaagcaaaataacagagaccactatcaaattaactcataaggctgcaggaagtaac
ctttgtgaaaccatacttctttcggcccatttacttgatcaagttcgagaaggaatatcc
ttaacacaagcactagaatcacccccgagtgaaaataggtcagccgctcaaagcttaacg
tttgaagcgcttcgcaataaacctaaaattcttcaagcactaaagcaatttctgcataaa
gagatagatcctgaagtagaggatctatttgtaattgctattagcactttattaaaagaa
tctcaaaaccaatataccgcttacacattagttaatgaaacagtgaatgccgcacaaaaa
tcattaaaaacaagacatgcaaaaggtctgataaatgcagttttaagaagagtaattgaa
aatccgcaagcattagaaattgatgttttagaggctcaatatccatcttggtgggtaaaa
catctaaaacgagcataccctgcacagttagcaccaatattagaagcaaatttgaagcct
gcaaaaatgttcttaagggtgaactcaaaaaaaatatctaaactggaatacatatcttta
ttaaatgatgccgatattcctatattagaaattccacaaaaatggcaaaaagttgctcca
tatgcaattgctttgcaaaattccatgcctgtgcaattgttgccgggatttaaagaggga
ttattaagcgtgcaagatttaggggcgcaaatcgcggcgtatttgatatctccagtcaat
gaggaatacatattagatgcatgtagcgcacctggtgggaaggcatcgcatttactagag
cttgcaaatattaatctagatgttcttgaaattgatgaagatcgaatgcaaagagtgcaa
gaaaatttatctcgactccaactgcaagcaaacctccttatcggggatgctacacatgcc
tcctcctggtggagtggcaaatattatgacgctatattagctgacgttccttgctcagca
actggcattattcggcgccatccagatattttgtatttgcggcgcagtgcagatatttca
caacttcaagacctacaacgtaaaattattgtggaattatgggaattattaaagccaggt
ggtagattagtatttgtgacttgttctatattcccgcaagaaggccaattacaactagag
tggtttgctgaaaatctcaaagatgcattacgattagagtgtcttggacaacttttgcca
gacgagtggcatgatggtttttattatggaatgttacaaaagaaaagatga
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