Polaribacter sp. MED152: MED152_02260
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Entry
MED152_02260 CDS
T02533
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom00061
Fatty acid biosynthesis
pom00540
Lipopolysaccharide biosynthesis
pom01100
Metabolic pathways
pom01212
Fatty acid metabolism
Module
pom_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MED152_02260 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
MED152_02260 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pom01005
]
MED152_02260 (lpxC)
01004 Lipid biosynthesis proteins [BR:
pom01004
]
MED152_02260 (lpxC)
Enzymes [BR:
pom01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
MED152_02260 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
MED152_02260 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pom01005
]
Lipid A
MED152_02260 (lpxC)
Lipid biosynthesis proteins [BR:
pom01004
]
Fatty acid synthase
Component type
MED152_02260 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
ApeP-like
HP0268
Motif
Other DBs
NCBI-ProteinID:
EAQ41500
LinkDB
All DBs
Position
complement(481168..482559)
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AA seq
463 aa
AA seq
DB search
MSKKQKTIQKEVTLSGVGLHTGNTVSMTLKPAPVNHGFAFSRVDLEGVPTIEAKAEYVVT
TQRGTNLEKNGVQIQTSEHVLAAAVGLDIDNLLIEVDASEPPIMDGSSKYFIEALEKAGI
EEQDAEIEEYVVKEIISYKDEVTGSEIILMPADEYQVTTMVDFGTKILGTQNATLDHISD
FKEEIAAARTFSFLHEIEMLLENDLIKGGDLNNAIVYVDKELSQSTMQKLKKAFKKDDIA
VKPNGILDNLNLHWANEAARHKLLDVIGDLALVGTRIKGKVIANKPGHLVNTQFAKKLAK
IIKAEKRNNVPAYDLNQPPLMDIHQIMDILPHRPPFLLVDRILELSDKHVVGMKNVTMNE
NFFVGHFPGAPVMPGVLQVEAMAQCGGILVLSTVPDPENYLTYFMKMDNVKFKQKVLPGD
TLIFKAELITPIRRGICHMQAYAYANGKLVAEAELMAQIAKKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagcaaaaaacaatacaaaaagaagttacgttatcaggtgtaggtttacac
actggtaatacagtttcaatgaccctaaaaccagccccagttaatcacggttttgctttt
agtagagttgatttagaaggtgttccaacaatagaggccaaagcagaatatgtagttact
actcaaagaggaactaatttagagaaaaacggcgttcaaatacaaacatcagaacacgtt
ttagctgctgctgtgggtttagatattgataatttattgatagaagtagatgcttcagaa
ccacctattatggatggatcttctaagtattttatagaagctttagaaaaagcgggtata
gaagagcaagatgcagaaattgaagagtatgttgtaaaagaaattatttcttataaagat
gaagttacaggtagcgaaattattttaatgcctgcagacgaatatcaagttacaacaatg
gtagattttggtactaaaattttgggtacacaaaatgctactttagatcatatttctgat
tttaaagaagaaattgctgctgcaagaacttttagtttcttacacgaaattgaaatgttg
ttagaaaatgatttaattaaaggtggagatttaaataatgcaattgtttatgtagataaa
gagttatctcaaagcactatgcaaaaattaaagaaagcttttaagaaagatgatattgca
gtaaaaccaaatggaatcttagacaacttaaatttacattgggcaaatgaagcagctcgt
cataaattattagatgttattggagatttggcgttagtaggcactaggattaaaggtaag
gttattgcaaataaacctggtcatttagtgaatactcaatttgctaaaaagttggcaaaa
attataaaagcagagaaaagaaataatgttcctgcttacgatttaaatcaaccaccactt
atggatattcatcaaattatggatattcttcctcatagaccaccttttttattagtagat
cgtattttagaactttctgacaaacatgttgtaggtatgaaaaatgtaacaatgaacgaa
aatttctttgttggtcattttccaggagcaccagtaatgccaggtgttttacaagtagaa
gcaatggctcaatgtggagggattttagttttaagtacagttccagatccagaaaattat
ttaacgtatttcatgaaaatggataatgttaagttcaaacaaaaggttttacctggagat
actttaatatttaaagctgaactaattacacctattagaagaggaatttgccatatgcaa
gcctatgcttatgctaatggcaaattagttgcagaagcagaattaatggcacaaatagcc
aagaaaaaataa
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