Polaribacter sp. MED152: MED152_02810
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Entry
MED152_02810 CDS
T02533
Name
(GenBank) DEAD/DEAH box helicase
Organism
pom
Polaribacter sp. MED152
Pathway
pom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MED152_02810
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NAT10_TcmA_helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
EAQ41610
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Position
complement(597128..598249)
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AA seq
373 aa
AA seq
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MSTFAGLGIRKDYIKSIKEIGITKPTDIQEKAIPVLLKSPTDFIGLAQTGTGKTAAFGLP
VLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDRIFLEAVFGGEKIDRQMNNL
KRTTHIVIATPGRLIDLIERGAVDISHVKTVILDEADEMLSMGFKQDLNRILKFTTKSDR
KTWLFSATMPDEIKRIVKTYMDANAPRIEINKNTLVNANIRHQFAKTTLKEKVADIVTFL
EKRQAQRGIIFCRTKAGAQNLAKQLVDEGFSAAALEGDMQQKERDKVMRAFKNESLQYLI
STDVSARGIDVRELEFVIHHQLPEQLEYYTHRSGRTARAGKTGTSLAFILPSELEKIHQL
QKELNIKFTEVTV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttgcaggattaggaattagaaaagattatataaaatcgataaaagaaatt
gggattacaaaacctacagatattcaagaaaaagcaatacctgtattactaaaatcacct
acagattttattggtttagcgcaaacaggtactggtaaaacagccgcttttggtttgcct
gttttacatcatatagatgctaattcagatcacattcaggctttaattctttctccaact
agagagttggtgcagcaaattaaaaaacaattgttcaagtttacgaaatatgtagatgat
cgtatttttttagaagccgtttttgggggtgaaaaaatagataggcaaatgaacaattta
aagagaaccacgcatattgtaattgcaactcctggtcgtttaatagatttaattgaaaga
ggtgcagttgatattagccatgtaaaaacagtaattttagatgaggctgatgagatgtta
agcatgggttttaaacaagatttaaaccgaattttaaagttcactacgaaatctgataga
aaaacatggttgttttctgcaacaatgccagatgaaattaagcgtattgtaaaaacatat
atggatgccaatgctcctagaattgagattaataaaaatacattggttaacgccaatatt
cgtcatcaatttgcaaaaactaccttaaaagagaaggtagcagatattgttacatttcta
gagaaaagacaagcacaaaggggtattatcttttgcagaacaaaagcaggtgctcaaaat
ttagctaaacaattggtagatgaaggcttttctgcagctgctttagaaggcgatatgcaa
cagaaagaacgagataaagtaatgcgtgcttttaaaaacgaaagtttacaatacttaata
tctacagatgtttctgcacgtggaattgatgttagagaattagagtttgtaattcatcat
caattaccagaacaattagaatattatacacatagaagtggtagaacagcaagagctggt
aaaactggtacatctttagcctttattttaccatcagaattagaaaaaattcatcaactt
caaaaagagttgaacattaaatttacagaagttacagtgtaa
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