Polaribacter sp. MED152: MED152_03055
Help
Entry
MED152_03055 CDS
T02533
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MED152_03055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pom03019
]
MED152_03055
03009 Ribosome biogenesis [BR:
pom03009
]
MED152_03055
Enzymes [BR:
pom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MED152_03055
Messenger RNA biogenesis [BR:
pom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MED152_03055
Ribosome biogenesis [BR:
pom03009
]
Prokaryotic type
rRNA helicases
MED152_03055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
PhoH
AAA_19
P-loop_SecA
CMS1
AAA_11
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
EAQ41659
UniProt:
A2U1L4
LinkDB
All DBs
Position
complement(642938..644251)
Genome browser
AA seq
437 aa
AA seq
DB search
MANNIKNQEEILAKLNIYELNEMQNEAIEVIENTKNTVILSPTGTGKTLAFLLPTLKMLD
VDNENIQALILVPSRELAIQIEQVIREMGTGFKVNAVYGGRSMAKDKIELKHTPSILIGT
PGRISDHFANDRFSKESIKTLILDEFDKSLEVGFEYEMRGIINQLPNLENRILTSATQET
DIPEFVGLKNAKTLNYLTGKKSKKLDIKIVTSSSKSKNQTLVDLLKYIGNQPGIIFCNLK
STIENVSDFLIKNNITHSTFSGGMEQRDRERSLIKFRNGTSQILLATDLAARGIDIPEIK
YIVHYELPQRIEEFTHRNGRTARVDAKGTAYVLKWAKEQLPDFIKGANNVDISNQQKLKS
IYWETLFISGGRKDKISKGDIAGLFFKKGALNKDQLGVIELKQDCAFVAIPKSESARLVE
KLNNVYLKKKKVRVFTV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccaataacattaaaaatcaagaagaaattttagcaaagctaaatatctacgagtta
aatgaaatgcaaaatgaagccatagaggttatagaaaacacgaaaaacactgttatttta
agtcctacaggaacaggaaaaacattggcttttttattaccaactttaaaaatgttagat
gttgataatgaaaatatacaggctttaattttggtgccttctagagaacttgctatccaa
attgagcaagtaattagagaaatgggaactggttttaaagtaaatgctgtttatggaggt
aggtctatggcaaaagataaaatagaattaaaacacacacctagtattttaataggaact
ccaggtagaatttccgatcattttgcaaacgatcgtttttctaaagaaagtatcaaaaca
ttaattttagatgaatttgataaatctttagaagttggttttgaatatgaaatgagaggt
attattaatcagttgcctaatctagaaaacagaattctaacatctgcaactcaagaaact
gacattccagagtttgttggtttaaaaaatgcgaagaccttaaattatttaacaggtaaa
aaatcaaagaaattagatattaaaatagtaacatctagcagtaaaagtaagaatcaaacc
ttagtagatttgctgaagtatataggaaatcaaccaggtataatattttgtaatttaaag
agtactatagaaaatgttagtgattttctaataaagaacaatattacccacagcacattt
tcgggtggaatggaacaaagagatcgtgagcgctctttaatcaaattcagaaacggaact
agccaaattttattggctacggatttggctgcaagaggcatagacatccctgaaattaaa
tacattgtgcattatgaattacctcaaagaatagaggagtttacccatagaaatgggaga
acagctagagtagatgctaaaggaacagcttatgttttaaaatgggctaaagaacaatta
ccagattttattaaaggagcaaataatgttgatatttccaatcaacaaaaattaaaatcc
atttattgggaaactttgttcatttctggaggtagaaaagataaaatatctaaaggagat
attgcaggattattttttaaaaaaggtgcattaaacaaagatcaattgggtgttattgaa
ttgaaacaagattgtgcttttgtagctataccaaaatcagaatcagcaagattggtagaa
aaactcaacaacgtttatcttaaaaagaaaaaggttagagtttttactgtttag
DBGET
integrated database retrieval system
