Polaribacter sp. MED152: MED152_04055
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Entry
MED152_04055 CDS
T02533
Symbol
msbA1
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MED152_04055 (msbA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pom02000
]
MED152_04055 (msbA1)
Enzymes [BR:
pom01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MED152_04055 (msbA1)
Transporters [BR:
pom02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MED152_04055 (msbA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_22
AAA_16
AAA_29
AAA
DEAD
MMR_HSR1
nSTAND3
ATP-synt_ab
AAA_25
NACHT
AAA_24
AAA_30
DUF87
APS_kinase
AAA_5
AAA_17
AAA_18
Motif
Other DBs
NCBI-ProteinID:
EAQ41859
LinkDB
All DBs
Position
873692..875521
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AA seq
609 aa
AA seq
DB search
MGYFKDILKYERKYRKFTLLNVVFNIFYAIFNVLSVLAFIPVLGILFETDKDIVVEPTYE
GITSIGSYLKESFYFFISEKIENDGQIKTLLFICLLALSLFFLKNFFRYLASYVITFLRT
GIVKDLRDKLYHKIVELPISYFTEKRKGDIIARMTADVQEVEVSILTSIETIVREPLTVV
IAISIMLFMSVKLTLFVFILLPVSGFIISSISKKLKANSVKAQQETGTFLSFIEETLTGL
RVIKGFNSEKIIERKFNASTTTFRNLMTSVFHRQTLASPMSEFLGSATIIAILWFGGREV
LSNTSSLQPDEFMGYIVLFYTVLNPIKLITTSYYNIQKGEASAERIMSVLNTENHIKDNP
NAIVKASFDSKIEFKNISFKYKKDYVLKDFSLTINKGETVALVGQSGSGKSTLANLITRF
YDVNSGDILIDGESIKNITKKSLRDLMGIVTQESILFNDTVENNIKLGTENATEAEVLEA
SEIANANEFIQNLPEKFHTNIGDSGGTLSGGQKQRLSIARAVLKNPPIMILDEATSALDT
ESEQLVQLALEKMMQNRTSLVIAHRLSTIQKADTIVVMKKGEIVEKGKHDELLSKKGEYF
KLVTMQSLS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggttattttaaagatattcttaaatatgaaagaaagtacagaaagtttacgttatta
aatgtagtctttaatattttctatgccatttttaatgttctttctgtccttgcatttatt
cctgttttaggcatattatttgaaacagacaaagacattgttgtagaacctacttatgaa
ggtattacaagtattggatcttatttaaaagaaagcttttacttttttatatcagaaaaa
atagaaaatgatggtcaaataaaaacattgttattcatatgtttattagcactttcatta
ttctttttaaagaactttttcaggtatttagcctcttacgtgattacattcttaagaaca
ggaattgttaaagacttaagagacaaactatatcataaaattgtagaactaccaatttct
tactttacagaaaaaagaaaaggagacattattgcaagaatgactgctgatgttcaagaa
gtagaagtttcaattttaacctcaatagaaactattgttagagaaccacttactgttgta
attgcaatttctattatgctttttatgagtgttaaattaacgctgtttgtttttatatta
ttaccagtttcaggatttatcatttcatcaattagtaaaaaattaaaagcaaactcggtt
aaagcacagcaagaaactggtacatttttatcatttatagaagaaacacttacaggttta
agagttattaaaggttttaattctgaaaagattatagagagaaagtttaatgcatctacc
actacctttagaaatttgatgaccagtgtttttcataggcaaacgttagcatcacctatg
agtgaatttttagggtctgcaacaattattgctattttatggtttggtggtagagaggtt
ttatcaaacacaagttctttacaaccagatgaatttatgggttatattgtattattctat
actgtattaaacccaataaaattaattacaacttcttactacaacattcaaaaaggtgaa
gcttctgcagaaagaattatgtctgttttaaatacagaaaatcatatcaaagacaatcca
aatgctattgttaaagcttctttcgatagtaaaattgagtttaaaaacatatcgtttaaa
tacaaaaaagactatgttttaaaagacttttctttaactattaataagggtgaaactgtt
gctttggttggccaatcaggaagtggtaaatctactttagcaaatctaattactcgtttt
tacgatgtaaattctggtgatattttaattgatggtgaaagcattaaaaacattactaaa
aaatctttacgagatttaatgggtattgtaacgcaagaatctattttatttaatgatact
gtagaaaataatataaaattgggtacagaaaatgcaactgaagcagaagtgttagaagct
tcagaaattgcgaacgcaaatgagttcattcaaaatttacctgaaaaattccatactaat
attggtgatagtggaggcactttatcaggaggtcaaaaacagcgtttatctattgctaga
gctgtattgaaaaatccgccaattatgattttggatgaagctacatctgccttagataca
gaatctgagcaacttgtacagttagctttagaaaagatgatgcaaaatagaacctcttta
gttattgctcatagattatctaccatacaaaaagcagatacaattgtcgtaatgaaaaaa
ggtgaaattgtagaaaaaggtaaacacgatgagttactatccaaaaaaggtgaatatttt
aagttagtaactatgcaaagcctatcttaa
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