Polaribacter sp. MED152: MED152_05345
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Entry
MED152_05345 CDS
T02533
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pom
Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_05345
Enzymes [BR:
pom01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
MED152_05345
DNA repair and recombination proteins [BR:
pom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
MED152_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF2380
Motif
Other DBs
NCBI-ProteinID:
EAQ42117
UniProt:
A2U0A7
LinkDB
All DBs
Position
1196597..1198129
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AA seq
510 aa
AA seq
DB search
MKTLRLILGDQLNSKHSWFTNDDDNSTYCLFEMRQETDYVKHHIQKVAGFFAAMRNFAEE
LNTQNKKVIYFKLNDELNTQNLTENINYLLEQHHFEKFEYLTPDEYRLDHQLKEFCDLLT
IESKVYTTEHFYTDRNDLASFFKGKKQFLMESFYRNMRKKHQILMVNEQPEGGKWNYDAR
NRKKWKGETLIPSAKNFDNDVSEIVTEIEKAGVETIGKINAKYFEYPISRKQALTQLSYF
CGHLLVHFGDYQDAMHTDQVFLFHSKISFAMNTKMISPKEIVETTLATYRKRKDEIDISQ
VEGFIRQIIGWREYMRGMYWMLMPDYKKENFLNNKNKLPDFFWTGKTKMNCLKNAIHNSL
DNGYAHHIQRLMITGNFALLTQIDPDEIDAWYLGIYVDAIEWVQLPNTRGMSQFADGGKI
ATKPYVSSGSYISKMSNYCDSCSYKKTKKFGDDACPFNSLYWNFLDEKQDKLSTNFRIKM
MYSLLNKMSAEDRTKIKEKANHIIENLDEY
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccttacgtttaattttaggagatcaactaaacagcaagcattcttggtttaca
aacgatgatgacaatagtacttattgtttatttgaaatgcgtcaagaaaccgattatgta
aaacatcatattcaaaaggtagcaggtttttttgctgccatgagaaattttgcagaagag
cttaatactcaaaacaaaaaggttatctattttaaattaaatgatgaattaaatactcaa
aatttaactgaaaatattaattacttacttgagcaacatcacttcgaaaaatttgaatat
ttaaccccagatgaatacagattagatcatcaacttaaagaattctgtgatttattaacc
atagaaagcaaagtatatactactgaacatttttatactgacaggaatgatttagcctct
tttttcaaaggcaaaaaacaatttttgatggaaagtttttacagaaacatgcgtaaaaaa
catcaaatattaatggttaatgagcaacctgaaggaggaaaatggaactatgatgctagg
aatagaaaaaagtggaaaggagaaactttaattccgtctgctaaaaattttgataatgat
gtttctgaaattgtaactgaaattgaaaaagctggggttgaaacaataggtaaaatcaat
gctaaatattttgaatatcctatttctagaaagcaagcgctaactcaactttcttatttc
tgcggacatttgttagttcattttggcgattatcaagatgccatgcatacagaccaagtt
tttctttttcattcaaaaatatcatttgcaatgaacacgaaaatgatatctcctaaagaa
attgtagaaacaacattagctacttacagaaaaagaaaagatgaaatagatatttcacag
gtagaaggttttataagacaaataattggttggcgagaatacatgagaggcatgtattgg
atgttaatgccagactacaaaaaagagaattttctaaataataaaaacaaattaccagat
ttcttttggacagggaaaacaaaaatgaattgtctaaaaaatgccattcacaattcatta
gataatgggtatgcgcatcacattcaaagactaatgattactggtaattttgcgctatta
actcaaatagatcctgatgaaattgatgcttggtatttagggatttatgtagatgctata
gaatgggttcaactgccaaacacaagaggtatgagccaatttgcagatggtggaaaaata
gcaacaaaaccttatgtttctagtggtagttatataagtaaaatgagcaattattgtgat
tcttgtagttataaaaaaacaaagaaatttggtgatgatgcatgcccatttaacagttta
tactggaattttcttgacgaaaaacaagataagcttagcaccaactttagaataaaaatg
atgtatagcttattgaataaaatgtctgcagaagacagaaccaaaataaaagagaaagca
aatcatattatcgaaaatttagatgaatattag
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