Polaribacter sp. MED152: MED152_08905
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Entry
MED152_08905 CDS
T02533
Symbol
mutS3
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pom
Polaribacter sp. MED152
Pathway
pom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MED152_08905 (mutS3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_08905 (mutS3)
DNA repair and recombination proteins [BR:
pom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MED152_08905 (mutS3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
GARS_N
AAA_22
ATPase_2
nSTAND_NTPase5
AAA_14
T6SS_FHA_C
AAA_29
CLASP_N
Motif
Other DBs
NCBI-ProteinID:
EAQ42829
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Position
complement(2004204..2006786)
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AA seq
860 aa
AA seq
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MKQYNAIKIKFPDAMLLFRVGDFYETFGDDAKKAAQVLGITLTKRGAGSDSETALAGFPH
HSLNTYLPKLVKAGMRVAICDQLEDPKMTKTIVKRGVTELVTPGVSLNDEVLQSKSNNFL
ASVHFDKKQLGISFLDVSTGEYLVAQGTAEYIDKLLQNFSPSEVLVQKQNKQQFLELFEN
RYYTFYLDDWVYQKEYAHETLQNHFKVKTLKGFGIQDLKNGIIAAGAVLYYLSETQHNQL
KHIQNISRIAEDNYVWMDRFTVRNLELYNPNSVNAVTLLDVIDKTISPMGGRLLKRWLAL
PLKNIDEIKNRHELVKFFIDSDEFSQTVTYQLKQISDLERLISKVATGKASPREIVLLKD
SLKAILPIKNEAEKSKNKAVQNLGKQLHTCEDLISKISETLFDEAPVNINKGNAIANNVH
QELDDLRAISSSGKQFLDDMLTRETEATGITSLKIAFNNVFGYYIEVRNTHKDKVPEQWI
RKQTLVSAERYITEELKEYETKILGAEEKIAKLEQEIFSKLLQYIIQFVDVVQENAQIIA
KIDCLLSFSVLAVDNNYVRPIMDESTDLEIKNGRHPVIEKQLPIDQTYIANDVVLNRNQQ
QIIMITGPNMSGKSAILRQTALIVLLAQMGCYVPAQNAKIGIVDKIFTRVGASDNISMGE
STFMVEMNETASILNNVSERSLILLDEIGRGTSTYDGISIAWAISEFLHEHPTKAKTLFA
THYHELNEMTTTFERIKNFNVSVKELEDNIIFLRKLVSGGSNHSFGIHVAKLAGMPNMVI
HRANKILAQLEKNNKNDDVKDVLKQTQHEEMQLSFFQLDDPLLENIREEILATNIDTLTP
IEALMKLNEIKRMLIKENGK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatacaatgccatcaagattaaatttcctgatgctatgttgctttttcgtgtt
ggagatttctatgaaacttttggtgatgatgctaaaaaagcagcacaagttttaggcatt
acacttaccaaaagaggtgcaggttcagactctgaaacagctttagctggttttcctcat
cattctttaaatacgtatttaccaaaattggtaaaagcaggaatgcgtgttgccatttgc
gatcaattagaagacccaaaaatgaccaaaaccattgtaaaacgtggagttacagaattg
gttactcctggagtttcgttaaatgacgaggttttacaaagcaaaagcaacaatttttta
gcttctgttcattttgataaaaaacaactcggaatttcatttcttgatgtttctacaggt
gaatatttggttgcacaaggaactgcagagtatattgataaattgttacagaatttcagc
ccaagtgaagttttagttcagaaacaaaataagcaacaatttttagaactttttgagaat
agatattacactttttacttggatgattgggtgtatcaaaaagaatatgctcatgaaacg
ttacaaaatcattttaaggtaaaaacgctgaaagggtttggaattcaagatttaaaaaac
ggaattattgctgcaggtgcagtattgtattatttatcagaaacgcaacacaatcaatta
aaacacattcaaaatattagcagaattgctgaagataattatgtttggatggatcgtttt
acagtgcgtaatttagaattgtacaacccaaattctgtaaacgcagttacgcttttagat
gtaattgataaaactatttcacctatgggtggaagattgttaaaacgctggttggctttg
cctttaaaaaatattgatgaaattaaaaatcgtcatgaattggtaaagttttttatagat
tctgatgagttttcgcaaactgtaacctatcaattaaaacaaatttctgatttagaaagg
ctcatttctaaagtggctacaggtaaagcttctccaagagaaatcgtattgttgaaagat
tcgctaaaagcaattttacctataaaaaatgaagctgaaaagagtaaaaataaagcagtt
caaaatttaggaaaacaactccacacttgtgaagatctaatctctaaaatttctgaaacc
ttgtttgatgaagctcctgtaaacatcaataaaggaaatgcaattgccaacaatgtacat
caagaattagatgatttacgcgcaatttcatcatcaggaaaacagtttttagatgatatg
ttaacgcgtgaaactgaagctacaggaattacaagcttaaaaattgcgttcaacaatgtg
tttggctattatattgaagttagaaacacacataaagataaagttcctgaacaatggatt
agaaaacagaccttagtttctgctgaaagatacattactgaagagcttaaagaatacgaa
accaaaattttaggagcagaggaaaaaattgccaaattagagcaagaaattttctcgaaa
ctgttgcaatacatcattcaatttgttgatgttgtgcaagaaaatgcacagattattgca
aaaatagattgtttgttgtctttttctgtattggctgtagataataattacgttcgtcct
attatggatgaaagtacagatttagagattaaaaacggtaggcatcctgtaattgaaaaa
caacttcctattgatcaaacctatattgctaatgatgttgttttaaacagaaatcagcaa
caaattataatgattactggaccaaacatgtctggtaaatcagccattttgcgtcaaact
gctttgattgttttattagcacaaatgggttgttatgtgcctgcgcaaaatgcaaaaatt
gggattgtagacaagatttttactagagttggtgctagtgataatatttctatgggcgaa
tctacatttatggtagaaatgaacgaaactgcatcaatcttaaataacgtttctgagcgt
agtttaattttgttagatgagattggtagaggaacctctacttatgatggtatttctatt
gcttgggccatttctgagttcttgcacgaacatcctaccaaagcaaaaacattatttgca
acccattatcacgaattgaatgaaatgaccaccacttttgagcgcattaagaactttaat
gtgtctgtaaaagaactagaagacaacataattttcttacgtaaattagtatctggaggc
tcaaatcatagttttggtattcacgttgctaaattagctggaatgccaaatatggtaatt
catagagcgaataaaatactagctcaactggaaaaaaataataaaaatgatgacgtaaag
gatgttttaaaacaaacacaacacgaagaaatgcagcttagcttttttcagttagatgat
cctttattagaaaatattcgtgaagaaatattggcaacaaatattgatacacttacacca
attgaggctttaatgaaactgaacgaaataaagcgaatgttgattaaagaaaatggtaaa
taa
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