Polaribacter sp. MED152: MED152_09640
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Entry
MED152_09640 CDS
T02533
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MED152_09640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_09640
Enzymes [BR:
pom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
MED152_09640
DNA repair and recombination proteins [BR:
pom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MED152_09640
Prokaryotic type
MED152_09640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-ProteinID:
EAQ42976
LinkDB
All DBs
Position
complement(2157107..2158150)
Genome browser
AA seq
347 aa
AA seq
DB search
MKFSNTLIFWYLQNKRDLPWRKTKNPYFIWLSEIMLQQTRVAQGLDYYQKFTTNFPTVFD
LANADESTVLKMWQGLGYYSRARNLHFSAKQIVSDFNGEFPSTFKDIIKLKGVGDYTASA
IASIAFNEPTAVVDGNVYRVLSRYFGINTPINSSKGIKEFKELAQSLIDKSQPGTFNQAI
MDFGAIQCKPKKPFCMFCPFSESCVALQKNLIEVLPVKEKKVKVKKRYFNYLVVKTKDDK
TILTERKGKGIWQGLYQFPLLEDTHMITKEELLASEMFNELFPNDVSISLFNKKDIVHKL
SHQHLYTQFWVIETEQLTSANISWKNIEDYPVPVLIANFLEDFKLKN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttctaacactttaattttctggtacttacaaaacaaaagggatttgccttgg
cgtaaaactaaaaatccatattttatttggttgtcagaaattatgttgcagcaaacaaga
gttgcgcaaggtttagactattaccagaaatttacgaccaattttccaacagttttcgac
cttgcaaatgcagatgaaagcaccgttttaaaaatgtggcaaggtttaggttattactct
agggctagaaatttacacttttctgccaaacaaattgtttcagattttaatggcgagttt
ccaagtacgtttaaagacatcataaaattaaaaggtgttggtgattacacagcatctgca
attgcctcaattgcctttaatgagccaacagcagttgtagatggcaatgtatatagagta
ctctctaggtattttggcattaacacacctattaattcatctaaaggaataaaagagttt
aaagaactggcacaaagtttaatcgataaatcacaaccaggtacttttaaccaagcaatt
atggattttggtgctatacaatgtaaacctaaaaaaccattttgtatgttttgtcctttt
tctgaaagttgtgtagccttacaaaagaatttaattgaagttttacctgtaaaagaaaag
aaagtaaaagtaaaaaaacgatactttaactatttagtggtaaaaactaaagatgataaa
acaattcttacagaaagaaaaggtaagggtatttggcaaggactttatcaatttccttta
ttggaagacactcatatgatcactaaagaggagctgctagcatcagaaatgtttaacgaa
ctttttccaaatgatgtttcaatatcgttatttaacaaaaaagatatagtacacaaactc
tctcatcagcatttgtacacacagttttgggtaatagaaacagaacagcttacttctgca
aacatttcttggaaaaacatagaagattatcctgtaccagttctaattgcaaatttccta
gaagattttaaactcaaaaattaa
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