Polaribacter sp. MED152: MED152_10105
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Entry
MED152_10105 CDS
T02533
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom03030
DNA replication
pom03410
Base excision repair
pom03420
Nucleotide excision repair
pom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MED152_10105 (polA)
03410 Base excision repair
MED152_10105 (polA)
03420 Nucleotide excision repair
MED152_10105 (polA)
03440 Homologous recombination
MED152_10105 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pom03032
]
MED152_10105 (polA)
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_10105 (polA)
Enzymes [BR:
pom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MED152_10105 (polA)
DNA replication proteins [BR:
pom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MED152_10105 (polA)
DNA repair and recombination proteins [BR:
pom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MED152_10105 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MED152_10105 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
HHH_2
HHH
HHH_5
Polycystin_dom
Motif
Other DBs
NCBI-ProteinID:
EAQ43069
LinkDB
All DBs
Position
complement(2254877..2257714)
Genome browser
AA seq
945 aa
AA seq
DB search
MADQKRLFLVDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFMNSLLDVIKRERPDHLAV
CFDKGGSTDRVEMFQEYKANRDATPEPITQAIPYICNILEAMHIPIMVKEGFEADDVIGT
LSKQAEKEGFKTFMVTPDKDFAQLVSENIFMYKPRFGGGYDIWGVPEVLEKFQVTDPLQV
IDFLGMMGDSADNIPGLPGVGEKTAKKFLAQFGSMEGLLANTDQLKGKMKEKVEANGELG
LLSKKLATIMLDVPVSFNAKDFTLDQPDVEKVKEIFNELEFRNLLTNFLKTFATETTTKT
AETDTKSESNTKKLATNAEGQFDLFAAPGSGSITQEESLSGFKNINNTNHFYQHIDSTLS
RKLLIKKLLQQPSVCFDTETTGLKALEVELIGIAFSYEIGKGYYVSFPENQEETKAILEE
FRPFFESEMIEKVGHNLKYDIKVLSNYNMPVKGKLFDTMIAHYLINPDMRHNMDVLAETY
LNYHPVSITELIGKKGKNQLSMRVVPIKDQTEYAVEDADITYQLKQHFTKELDSGNVTEL
FNKVELPLVSVLTAMEIEGINVDTNFLKQLSTALTDDINRLEKEIYEQAGEEFNIASPKQ
LGIVLFENMKLVDKPKKTKTGQYKTGEDILSFLAKEHKIIRDIQEYRQYKKLQSTYVDAL
PNEINKKTGRIHTQYMQAVAATGRLSSNNPNLQNIPIRTERGREVRKAFVPKDENYVLLA
ADYSQIELRIIAALSEEETMINAFKNGEDIHASTAAKVFGVDINDVTREQRSNAKTVNFG
IVYGVSAFGLSNQTDLSRGEAKELIDTYYETYPKLKAYMSAQVDFAREHGYVETVLNRRR
YLKDINSRNAMVRSGAERNAVNAPIQGSAADIIKLAMINIHNRFIQEGFKSKMLLQVHDE
LVFDAHKDELETIKPIIKNEMENAFKMTVPLDVEMGIGQNWLEAH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaaaaaagactttttctagttgatgcttatgcattaattttcagaggatat
tacgcatttataaagaacccaagaataaactctaagggtttagacacatctgctattatg
ggttttatgaactctctattagatgttattaaacgtgaaagaccagatcatttagcggtt
tgttttgataaaggtggaagcacagatagagttgaaatgtttcaagaatacaaagcaaat
agagatgctactccagaaccaataacacaagcaataccttacatctgcaatattttagaa
gccatgcatataccaattatggttaaagaaggttttgaggcagatgatgttattggtaca
ctttctaagcaagcagagaaagagggttttaaaacctttatggttactccagataaagat
tttgcacaattagtttcagaaaatatcttcatgtacaagccacgttttggaggtggttat
gacatttggggtgtgccagaagtattagaaaaatttcaagttacagatcctttacaagta
atcgactttttaggaatgatgggtgattctgcagataacattcctggtttacctggagtt
ggagaaaaaactgcaaagaaatttttagcgcaatttggttctatggaaggcttattggct
aacacagatcaattaaaaggtaaaatgaaagaaaaggtagaagcaaatggtgaacttggt
ttactttctaaaaagcttgctaccattatgttagatgttcctgtttctttcaatgccaaa
gattttacattagatcagccagatgtagaaaaagtgaaagaaatttttaatgaattagaa
ttcagaaaccttttaacaaacttcttaaaaacatttgctacagaaaccaccacaaaaaca
gctgaaacagatactaaaagtgaaagcaatactaaaaaattggcaacaaatgcagaaggt
cagtttgatttatttgcagcacctggttctggcagtatcactcaagaagaaagtttatct
ggctttaaaaacataaacaacacaaatcatttttatcagcacatagatagtacattatct
cgtaaactgttaattaaaaaattattacaacaaccttctgtttgttttgatacagaaact
acaggtttaaaagcattagaggttgagttaataggtattgcattttcttatgaaattggt
aaaggatactatgtttcatttccagaaaaccaagaagaaacaaaagctattttagaggaa
tttagaccattttttgaatcagaaatgatagaaaaggttggtcataatttaaaatatgat
attaaggttttatctaattacaacatgcctgttaaaggtaaattgttcgatactatgatc
gctcattacctcatcaacccagatatgaggcataatatggatgttttggctgaaacgtat
ttgaattaccacccagtttcaatcacagaactaattggtaaaaaaggtaaaaatcagctt
tctatgagggttgttcctataaaagatcaaacagaatatgctgttgaggatgcagatatt
acctatcaactaaaacagcactttaccaaagaattagatagtggtaacgttactgaactt
tttaacaaagtagaattgcctttggtatctgttttaacagctatggaaattgaaggaatt
aatgtagatacaaactttctaaaacaactttctacagctttaactgatgacataaataga
ctagaaaaagaaatttacgaacaagcaggagaagaatttaatatagcctctccaaaacaa
ttaggaattgtattgtttgaaaatatgaagttggtagataagcctaaaaaaaccaaaaca
ggtcaatataaaactggtgaagatattttatcattcttagctaaagaacataaaataatt
agagacattcaagaatacaggcaatacaaaaaactacaaagtacctatgttgatgcctta
ccgaacgaaattaataaaaaaacaggtagaattcacacacaatacatgcaagctgttgct
gcaactggtagattaagctctaacaatcctaacctacaaaacataccaataagaactgaa
agaggacgtgaagtacgtaaagcatttgtaccaaaagatgaaaattatgttttattggca
gctgattacagccaaatagaattgcgaattattgcagctttaagtgaagaagaaaccatg
ataaatgcttttaaaaatggcgaagacattcatgcttctactgctgctaaagtttttggt
gttgatataaatgatgttactcgcgaacaaagaagtaatgctaaaaccgtaaactttggt
attgtttatggagtttctgcttttggcttaagtaaccaaacagacttgagcagaggtgaa
gccaaagaattaattgatacgtattatgaaacatatcctaaattaaaagcatacatgtct
gctcaagtagattttgctagagaacatggttatgtagaaaccgttttaaacagacgtagg
tatttaaaagacattaattctagaaatgctatggtgagaagtggtgcagaaagaaatgct
gtaaatgctccaatacagggctctgctgcagatattataaaactagccatgattaatatt
cataatagattcattcaagaaggttttaaatctaaaatgctattgcaggtgcatgatgaa
ttggttttcgatgctcataaagatgaattagaaactattaaacctattataaaaaacgaa
atggagaatgcatttaaaatgactgtacctttagacgtagaaatgggaattggccaaaat
tggttagaagcgcattag
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