Polaribacter sp. MED152: MED152_11284
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Entry
MED152_11284 CDS
T02533
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pom
Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pom03032
]
MED152_11284 (topA)
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_11284 (topA)
Enzymes [BR:
pom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MED152_11284 (topA)
DNA replication proteins [BR:
pom03032
]
Prokaryotic type
DNA Topoisomerases
MED152_11284 (topA)
DNA repair and recombination proteins [BR:
pom03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MED152_11284 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HTH_7
Motif
Other DBs
NCBI-ProteinID:
EAQ40613
LinkDB
All DBs
Position
2516335..2518833
Genome browser
AA seq
832 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFQVESSYGHIADLPSKELGIDVDGDFSPKYIVSDDK
KPVVKKLKSLAKKAETVWLASDEDREGEAIAWHLKEQLDLKENNTKRIVFHEITKKAILK
AVENPRDIDYHMVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVAVRLIVERER
SIQEFKPETHYKVVAEFSNNEGKKFKATIPKNFDSKKEAESFLESCANADFKIADLTKKP
AKKSPAAPFTTSTLQQEASRKLGFAVGRTMQVAQRLYEAGLITYMRTDSVNLSVDARNEA
EEEIIASYGKEYSKQRVFKSKAKGAQEAHEAIRPTNMKMHSIDTEYDQNRLYDLIWKRTL
ASQMSDAQLERTNIKIENSENEKIFTANGEMIKFEGFLKVYLEGKDDDEEEQAGMLPNLK
VNESLDYIFINATQRFTSPPYRFTEASLVKQLEELGIGRPSTYAPTISTVQRRGYVEKGQ
NEGIERAYEQMILTSGAVKTQQLTEKTGSDKNKLVPTDIGNIVNDFLVANFSNILDFGFT
AKVENSFDDISEGEEDWTEMIKDFYTKFHDNVEDVKENAERESGERILGKHPKSGKTVLV
RLGKFGPIAQIGAPDDEEKQFASLNKDQNLGTITLEEALELFLLPKTLGTYEDEEVVVSN
GRFGPYIRFGKMFVSLDKGENPMEVDLPRAEKLIRAKQKADAPIYHYEDLPVQKGVGRFG
PFIKWNGMFINVNKKYDFDNLSDDDIVELIEVKKQKEIDKVIHNWEDVGIRVEKARWGRF
NVLKGKVKIELPKTTDIEKLSKEEAVKMIEAKTPKKKTAKKKTTKRKTVKKK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtaatagtagagtcaccagcaaaagctaaaactatcgaaaaattt
cttggaaaagattttcaagtagagtcgagttatgggcacattgcagatttaccatcaaaa
gaattggggattgatgtagatggtgattttagtcctaaatatatagtttccgatgataaa
aaaccagttgttaaaaaattaaaaagtttagcaaaaaaagcagaaacggtttggttagca
agtgatgaagatagagaaggagaggctattgcttggcacttaaaagagcaactagattta
aaagaaaataataccaaacgtattgtttttcacgaaatcactaagaaagctattcttaag
gctgtagaaaatcctagagatatagattatcatatggtaaacgctcagcaagcacgtaga
gttttagatagactagtgggttatgagttatcaccagtattatggcgaaaagtaaaagga
ggtttgtctgcaggtagagtacaatctgtagctgtgcgtttaattgtagagagagaaaga
agtatacaagaatttaagccagaaactcattataaggttgttgctgaattttcgaacaat
gaaggaaagaagtttaaagcaacgattcctaaaaattttgattctaaaaaagaagcagaa
agtttcttagaatcttgtgcaaatgccgattttaaaattgcagatttaacaaaaaagcct
gcaaaaaaatcgccagcagcaccttttacaacatcaactttacaacaagaagcatctcgt
aaattaggttttgcagtgggtagaactatgcaggttgcacaacgtttgtatgaagctggt
ttaattacctatatgagaacagatagtgtaaatttatctgttgatgcaagaaacgaagct
gaagaagaaattatagcttcttatggtaaagaatatagtaagcaaagagtgtttaaatct
aaagccaaaggtgctcaagaagcacatgaagcaattaggcctactaacatgaaaatgcat
tctatagatactgaatatgatcaaaatagattgtacgatttaatctggaaaagaacatta
gcctctcaaatgagtgatgctcaattagagagaactaacattaaaatagagaattcagaa
aacgaaaaaatctttactgcaaatggtgagatgattaagtttgaaggattcttaaaagtg
tatttagaaggtaaagatgatgatgaggaagaacaagctggtatgttgcctaatcttaaa
gttaatgaaagtttagattatatttttattaatgctactcagcgttttacaagtccacct
tatcgttttacggaagcatctttggttaaacagttagaagaattgggtattggtcgtcca
tcaacctatgcaccaacaatttctactgttcaaagaagaggttatgtagaaaaaggtcag
aatgaaggtatagaaagggcttatgagcaaatgattttgactagtggtgctgtaaaaaca
caacaattaaccgaaaaaacaggttcagataaaaataaactagtaccaacagatatagga
aacattgtaaatgactttttagtagcaaatttctcaaatatactagacttcggatttact
gcgaaagtggaaaattcttttgacgatatttctgaaggagaggaagattggacagaaatg
attaaagatttttacaccaaatttcatgacaatgtagaggatgttaaagaaaatgcagaa
agagaaagcggagaacgcattttagggaaacatccaaaatctggtaaaacagttttagtt
agattaggtaaatttggacctattgctcaaattggagctccagatgatgaagaaaagcaa
tttgcaagtttaaataaagatcagaatttaggaacaataactttagaagaggctttagag
ttgtttttgttgcctaaaaccttaggaacttacgaagatgaagaagttgtagtttctaac
ggacgatttggaccttacattcgttttggaaaaatgtttgtttctttagataaaggtgaa
aaccctatggaagttgatttaccaagagccgaaaaattaattagagcaaagcaaaaggca
gatgctcctatttaccattatgaagatttaccagtgcaaaaaggtgtaggtaggtttggg
ccatttataaaatggaatggtatgtttatcaacgtaaataaaaaatacgattttgataat
ctttctgatgatgatattgtagaattaatcgaagttaagaaacagaaagagatagataag
gttattcataattgggaagatgttggtattcgtgtggaaaaagcaagatgggggagattt
aatgttttaaaaggcaaagtaaaaattgagcttcctaaaactacagatattgagaaacta
tctaaagaagaggctgttaagatgattgaagcaaaaacacccaagaaaaaaacagcaaag
aaaaaaacgactaagagaaaaacagtaaaaaagaaatag
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