Polaribacter sp. MED152: MED152_11349
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Entry
MED152_11349 CDS
T02533
Name
(GenBank) small-conductance mechanosensitive channel
KO
K16052
MscS family membrane protein
Organism
pom
Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pom02000
]
MED152_11349
Transporters [BR:
pom02000
]
Other transporters
Pores ion channels [TC:
1
]
MED152_11349
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
EAQ40626
UniProt:
A2U403
LinkDB
All DBs
Position
2531258..2532865
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AA seq
535 aa
AA seq
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MAQDIASDSVFVDLSNPRATLNTHLNFLQDDNYQPKKSAKTIRGLEQKKAVRKAIKIKQV
LDGKGLYIDLNSIPTDEDYKDSVGINAYSKYIIFPNRLPEIYLEKKGNNWYYSEETVLKI
DAIYNNVFPWYINWLQEIVPEYGHKGFFGIEIWQLVALLILLSLVILLYYFFRKIAFWLL
KKIQHYITKSNADLEVDKVLKKLAHPISLLLSINLIDVVFPSLQFTLEVNRWVFLGLSIV
ETVFWIYVFLKLIKVVMKIYAEFTENTHSRLDDQLVPILNNFFTGLVLVLGFFRLLTIFG
VDTTTLIAGATIGGLAFALASQDTVKNLIGTIMIFLDKPFHIDDWIEAGEVVGTVERVGF
RSTRVRAADTSIYQIPNSKLSEIVINNKGLRLYRRYNTNLGLRYDTPPELIEAFVNGVRQ
IIIEHPETRSDSYNVEFTGFGDSALLIMVNVYFKSLAWSEEQTSKHRLHIAIIKLAAALG
VEFAFPSTTVTIEQFPDKSNLSPKYNTSKESINATIQNILTEFKNDVPPENTPES
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagacattgcgtctgatagcgtttttgtagatttaagtaacccaagagctaca
ctaaatacacacttaaattttttacaggatgataattatcaacctaagaaatctgcaaaa
actattagaggtttagagcagaaaaaagcagtaaggaaggccattaaaataaagcaggtt
ttagatggtaaaggtctttatattgatttaaattcaataccaacagacgaagattataaa
gattctgtaggtattaatgcatattctaagtatatcatttttccaaacagattgccagaa
atttatttagaaaaaaaagggaacaattggtattattcagaagaaactgtactgaaaatc
gatgcaatctacaacaatgtttttccttggtatataaattggttgcaagaaatagtgcct
gaatatggccataaaggattttttggtatcgaaatttggcaattagttgcgctattaatt
ttactgagtttagtaattctattgtattatttctttagaaaaattgccttttggttatta
aagaaaattcaacattatattactaaaagtaatgctgatttagaagtagataaggtgcta
aaaaaattggcacacccaattagcttgttgctttctattaatttgatagatgtagttttt
ccttctttacaattcactttagaagtaaatagatgggtttttcttggattgagtatcgtt
gaaactgttttttggatttacgttttcttaaagctgattaaagtagtgatgaaaatttat
gctgagtttacagaaaatacacacagcaggttagatgatcaattagtgccaattctaaat
aacttttttacaggtttagtacttgttttagggttctttagattattaaccatatttggt
gtagatactacaacgttaatagcaggtgctacaattggtggtttggcttttgctttagca
tcgcaagacactgttaagaatttgattggaaccataatgattttcttagataaacccttt
catatagacgattggatagaagcaggtgaagttgtaggaactgttgaaagagtaggattt
aggtctactagagttagagctgcagatacttcaatttatcaaataccaaatagtaaactt
tctgaaattgtaatcaataataagggcttacgtttatacagaaggtataataccaatctt
ggtttaaggtatgatactccaccagaattaatagaggcttttgtaaatggtgttcgccaa
ataattatagaacatccagaaaccagatctgattcttacaatgtagagtttacaggtttt
ggagattctgctttattaataatggtaaacgtatattttaaaagtttagcatggagcgaa
gaacaaacttctaaacataggctgcatattgctattataaaattagcggctgctttgggt
gtagagtttgcattcccatctacaactgtaactatagagcaatttccagataaaagtaat
ttatcacctaaatacaataccagtaaagaaagtattaatgctacaatacaaaatattctt
actgagtttaaaaatgatgttccaccagaaaacacaccagaaagttaa
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