Polaribacter sp. MED152: MED152_11754
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Entry
MED152_11754 CDS
T02533
Symbol
dnaQ5
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom03030
DNA replication
pom03430
Mismatch repair
pom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MED152_11754 (dnaQ5)
03430 Mismatch repair
MED152_11754 (dnaQ5)
03440 Homologous recombination
MED152_11754 (dnaQ5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pom03032
]
MED152_11754 (dnaQ5)
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_11754 (dnaQ5)
Enzymes [BR:
pom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MED152_11754 (dnaQ5)
DNA replication proteins [BR:
pom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MED152_11754 (dnaQ5)
DNA repair and recombination proteins [BR:
pom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MED152_11754 (dnaQ5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
GIY_YIG_2
DUF7508
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
EAQ40707
UniProt:
A2U3S1
LinkDB
All DBs
Position
complement(2607272..2608657)
Genome browser
AA seq
461 aa
AA seq
DB search
MYTVIDIETTGNGFKGQKITEISIFVFDGKKIIDEFTSLINPEQNIPPFITNLTGITNAM
VRYAPKFHEIAKKVEELTRDTIFVAHNVNFDYNIIRDEFKSLGFDFKRKKLCTVRLSRKI
MPGLRSYSLGNICIDENIPINGRHRAKGDAEATTELFRRLIERDDSFIINSFLNPRSRQA
TLPPLLDKKVVDNLPETFGVYYFKNSAKEIIYVGKANNIKQRVISHFYDKKKKEREMCLE
TAHLSYTETGSELLALLLESSEIKTKFPKYNRSQKNSNSAIGLFSYEDQKGILHLAFNKL
KLTPNPIMTFYSVSECRAFLESLCTEYQLCPKYCHLQTNVKSCFSYHLQNCNGVCIDKED
VATYNLRVQKAIATVGFEAKNLVIKETGRNEHEIGFTLILDGSYKGFGYIDKSQAEELEQ
PEDYQFFLQPKRDNRDVQRILTAYLKKNSKEKQEENGEISL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgtatacagtaatagacatagaaaccacaggtaatggctttaagggtcaaaaaattact
gagatttctatttttgtttttgatggtaaaaaaataattgatgagtttacatccttaata
aatccagaacaaaatatacctccatttattacaaatctaactggtattacaaatgctatg
gttaggtatgcacctaaatttcatgaaattgctaaaaaagtagaagagcttacaagagat
actatttttgtagcgcataatgtaaatttcgattacaatattattagagatgagtttaaa
agtttaggatttgattttaaacgtaaaaaactttgtactgttcgtttatcgagaaaaata
atgcctggtttacgttcttatagtttgggtaatatttgtatagatgaaaatatacctatt
aatggcagacacagagcaaaaggtgatgcagaagcaacaacagaattatttagaagactt
attgaaagagatgatagttttatcatcaattcatttttgaatccgcgttcacgccaagca
accttacctcctttattagataaaaaggtggtagataatttaccagaaacttttggagtg
tactattttaaaaatagtgctaaagaaattatttacgttggtaaagcaaacaatataaag
caaagagtaataagtcatttttacgataaaaagaaaaaagaaagagaaatgtgcttagaa
actgcacacttatcttacacagaaactggaagtgaacttttggctcttttattagaatca
tcagaaattaaaacaaaatttcctaaatataacagatcacagaaaaatagtaattctgcc
attggcctattttcttatgaagatcaaaagggaattttacatttggcgtttaataagcta
aaattgacaccaaacccaataatgactttctattcagtttctgaatgcagagctttttta
gaaagtttatgtaccgagtatcaattatgccctaaatattgtcatttgcaaaccaatgtt
aaaagctgctttagttatcacttacaaaattgtaatggtgtttgtattgataaagaagat
gtagctacgtataatttacgtgtacaaaaagcaattgctactgtaggttttgaagctaaa
aatttggttattaaagaaactggaagaaatgagcacgaaataggttttacactaatttta
gatggctcttacaaaggttttgggtatattgataaaagtcaagctgaagaattagaacag
ccagaagattatcaattctttttacaaccaaagagagacaatagagatgtacaaagaatt
ttaactgcatatttgaaaaagaattctaaagaaaaacaggaagaaaatggagaaatcagc
ttataa
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