Polaribacter sp. MED152: MED152_11814
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Entry
MED152_11814 CDS
T02533
Symbol
dnaE3
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom03030
DNA replication
pom03430
Mismatch repair
pom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MED152_11814 (dnaE3)
03430 Mismatch repair
MED152_11814 (dnaE3)
03440 Homologous recombination
MED152_11814 (dnaE3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pom03032
]
MED152_11814 (dnaE3)
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_11814 (dnaE3)
Enzymes [BR:
pom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MED152_11814 (dnaE3)
DNA replication proteins [BR:
pom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MED152_11814 (dnaE3)
DNA repair and recombination proteins [BR:
pom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MED152_11814 (dnaE3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
EAQ40719
LinkDB
All DBs
Position
complement(2620629..2624966)
Genome browser
AA seq
1445 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCIQIAWQLHDEMGRVIEHNDFLIQPEGFNIPY
DAERIHGISTELAQQEGITLEEGLALFNEVLQKTKFVVGQNVEFDLNIMGCEFHRLATET
NLNQLPVLDTCTEKTALLCQIPGGRGGKFKLPTLTELHKHLFGIDFAEAHNATADVEATT
RCFLELIRIREFTKEELDVDQEYFKNFSEENPKPIQLIGLKHINLKKESDKIRKRLEKLK
DTEETRSTSEGLAELKDVQFAHLHNHTQFSVLQSTMQIGNIVKAAAKDNMPAVAMTDTAN
MMASFHFVSAVLNHNKTAETPMKPIIGCEFNICEDHKNKSQKDNGYQVVLLAKNKNGYHN
LAKMSSIAFVDGFYYVPRIDKEIIKKYKDDIIVLTGNLYGEVPSKILNLGEKQAEEALLW
WKEQFQDDFYIELMRHNQQDENIVNETLLKFSKKHDIKIVATNNTFYLEKKDANAHDILL
CVKDGEKQATPKGKGRGYRYGLPNEEYYFKSSDEMKTLFADLPEAIINIQEIVDKIEIFT
LARDVLLPAFDIPDEFKDARDNEDGGKRGENNFLKHLTFEGAKIRYGEITPEIKERLDFE
LEVIEKTGYPGYFLIVEDFIREARKMDVAVGPGRGSAAGSVVAYCLWITNIDPIKYDLLF
ERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARV
LDLPLFEADRIAKLIPGIKLKNIFGDDPKSKGKVDGLRAEEKQLVEELRTMSSGSDLVSE
TINKATILEGSVRNTGIHACGVIITPGDITNYVPVALAKDSDMYVTQFDNSVVESAGLLK
MDFLGLKTLTLIKDTVKIVKAKHGVELDPENFPLDDEKTYELFQRGETVGIFQYESPGMQ
KHMRSLKPTVFADLIAMNALYRPGPMEYIPSFINRKHGTEDIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFIEQAGKNGHDEEKLEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMKDIKAVSFFMEEC
KRMGLEVLGPDINESYLKFSVNQEGAVRFGMAAVKGVGAAAVRAIIAERKENGNYSSIFD
LAKRVDLRAANKKSFDSLIKAGAFDSFSDTHRAQYFATDEKGITFLERAMKFGSKYQENE
NSAQVSMFGETSTVQFPEPDIPECETWGTMELLSQEKEVIGIYISAHPLDDFKNEMIFCN
ASLKYFKGDLNKYVGMNLSFAGIITEVQHRVSKAGKGWASFFIEDYGDSNEFRVFGEDYL
KFKHFLVPNSFLFVRATIQAGWTNKDGVQGEPRIKFTEFKLLHDIMDTLCKKITIKMSVD
ELSEERILNLESILRNVNGTQSLNFTIWDAKEKIELSLPSRNTKIKISSELLATLDKQQI
NYKLN
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatactgaaactacaggtttaccaaaaagctggaatgccccaatt
acagacacagacaattggccaagatgcatacaaattgcttggcaattgcatgatgaaatg
ggtagagttatagaacacaatgattttttaattcaacctgaaggatttaacattccttat
gatgcagaaagaattcatggtatttctactgagttagcccaacaagaaggtattacatta
gaagaaggcttggctttatttaacgaagttttacaaaaaacaaaatttgttgttggtcaa
aatgtagagttcgatttaaatattatgggctgtgaatttcacagactagctacagaaaca
aatcttaatcaattaccagttttagatacttgtacagaaaaaacagcccttttatgtcaa
attcctggtggtagaggaggtaaatttaagttacccacacttacagaattacacaagcat
ttatttggaatcgattttgctgaagctcacaatgcaacagcagatgttgaagctacaact
cgctgtttcttagaactaattcgaattagagagtttaccaaagaagagctagatgtagat
caagaatattttaaaaacttttcagaagaaaatcctaaaccaattcaattaattggttta
aaacacatcaacctaaaaaaagagagtgataaaatacgtaagcgtttagaaaagctaaaa
gatactgaagaaaccagatctacttcagaaggtttagcagaattaaaagacgttcaattt
gcgcatttacacaatcatactcagttttctgtactacaatctaccatgcaaattggtaac
attgtaaaagcagcagctaaagacaatatgcctgcagttgcaatgacagacactgcaaac
atgatggcttccttccattttgtgagtgcagtattaaaccataacaaaactgcagaaaca
ccaatgaaaccaatcattggttgtgagttcaatatttgtgaagatcataaaaataaatct
caaaaagacaatggttatcaagttgtattactagccaaaaacaaaaatggttatcacaat
ttagcaaaaatgtcttcgattgcttttgttgatggattttactacgtaccaagaattgac
aaagaaatcattaaaaaatacaaagatgatatcattgttttaactggtaatttatatgga
gaagtaccaagtaagattttaaatcttggagaaaaacaagctgaagaagccttactttgg
tggaaagagcaatttcaagacgatttctacattgagttgatgcgtcataatcaacaagat
gaaaatatagtaaacgaaactttattaaaattctctaaaaaacatgatattaaaattgtt
gctacgaacaatactttctatttagagaaaaaagatgcaaatgcacacgatattttactg
tgtgtaaaagatggcgaaaagcaagctacacctaaaggaaaaggtagaggctatagatat
ggtttacctaatgaagaatactatttcaagtcttcagatgaaatgaaaacgctttttgca
gacttgccagaggctattatcaatattcaagaaattgtagataaaattgaaatatttact
ttagcaagagatgtactgttacctgcttttgatattcctgatgaatttaaagacgcaaga
gataatgaagatggaggtaaacgtggtgaaaacaactttttgaaacacctaacttttgaa
ggtgctaaaatacgttatggagaaataacgcccgaaattaaagaacgtttagattttgaa
ttagaagtaatcgaaaaaacaggttatcctggttactttttaattgtagaagattttatt
cgcgaagccagaaaaatggatgttgcagtgggtccaggtcgtggttctgcagctggttca
gtagtcgcttattgtctttggataaccaatattgatcctattaaatacgatttacttttt
gagcgtttcttaaatcctgaacgtgtttctatgccagatatcgatatcgattttgatgat
gaaggtcgaggtcgagttatggattatgtaattgataaatatggtgccaaccaagtagca
caaattataacttatggaacaatggctgcaaaatcttcgattagagatacagccagagtt
ttagatttaccactttttgaagcggatagaattgccaaattaattcctggaataaagctt
aaaaatatttttggtgatgaccctaaaagtaaaggtaaagtagatggtttacgtgcagaa
gaaaaacaattagtagaagagttaagaaccatgtcttctggttctgatttagtttcagaa
acgataaataaagctacaattttagagggttccgtaagaaatacaggtattcatgcttgt
ggtgtaatcattacacctggtgatattacaaattacgttcctgttgctttggctaaggat
tcagatatgtatgtaacccaatttgacaactctgtagtagaatctgcaggtttgttgaaa
atggacttcttagggttaaagacactgacattaattaaagacaccgtaaaaattgtaaaa
gcaaaacatggtgtagaattagatcctgagaactttcctttagatgatgaaaaaacatac
gagttattccaaagaggagaaacagtaggtatttttcagtatgaatctccaggaatgcaa
aaacacatgcgctcactaaagccaacagttttcgcagatttaattgcaatgaatgcattg
tacagacctggaccaatggaatacattccgagttttatcaacagaaaacacggaacagaa
gatattgagtacgatttaccagcaatggaagaatacttggcagagacctatggaattaca
gtttaccaagagcaagtaatgttactctcgcaaaaactggcagattttaccaaaggtgaa
gccgatgttttacgtaaagccatgggtaaaaagcaaattgctgtacttgataaaatgaaa
cctaagtttattgagcaagcaggtaaaaatggtcatgatgaagaaaagctagaaaaaatc
tggaaagattgggaagcctttgcaagttatgccttcaataaatctcactctacttgttat
gcttggattgcttatcaaactgcatatttaaaagcacattatcctgcagaatatatggct
tctgtactttctaacaacatgaaagatattaaggctgtttccttctttatggaagaatgt
aaacgtatggggctagaggttctaggaccagatattaatgaatcttatttaaaattttct
gtaaatcaagaaggtgctgttcgttttggaatggctgcagttaaaggtgttggggctgca
gctgtaagagcaataattgcagagcgcaaagaaaacggaaattattcctctatttttgat
ttagcaaaacgtgtagatttaagagctgccaataaaaaatcttttgacagtttaataaaa
gcaggtgcttttgattctttttcagacacacatagagctcaatattttgctaccgatgaa
aaaggaattacctttttagaaagagcaatgaaatttggtagtaagtaccaagaaaatgaa
aattcagctcaagtttctatgtttggtgaaacctctactgtccaatttcctgaaccagat
attcctgagtgtgaaacttggggaaccatggaacttttatcacaagagaaagaagtaatc
ggaatttacatttctgcacatcctttagatgattttaaaaatgaaatgattttctgtaac
gcctctctaaaatactttaaaggagatttgaacaaatacgttggtatgaacttatctttt
gcaggtattataacagaagtacaacacagagtatctaaagcaggtaaaggttgggcctct
ttctttattgaagattatggtgatagtaatgaatttcgtgtttttggagaagattactta
aagtttaagcattttctagttcctaattcttttttatttgtgcgtgcaacaattcaagct
ggttggaccaacaaagatggcgtacaaggtgaaccaagaattaagtttacagagtttaaa
ttgcttcatgatattatggatactttgtgtaaaaagattaccattaaaatgtctgtagat
gaacttagtgaagaacgcattttaaatttggaaagtattttaagaaatgtgaatggtaca
caaagtttaaattttacaatctgggacgctaaagaaaagattgaattgagtttaccaagc
agaaatactaaaattaaaatttcttctgaacttttggcaactttagataagcagcaaatt
aattataagcttaattaa
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