KEGG   Polaribacter sp. MED152: MED152_11904
Entry
MED152_11904      CDS       T02533                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pom  Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:pom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pom03032]
    MED152_11904
   03400 DNA repair and recombination proteins [BR:pom03400]
    MED152_11904
Enzymes [BR:pom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     MED152_11904
DNA replication proteins [BR:pom03032]
 Prokaryotic type
  DNA Topoisomerases
   MED152_11904
DNA repair and recombination proteins [BR:pom03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MED152_11904
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact CaMKII_AD
Other DBs
NCBI-ProteinID: EAQ40737
UniProt: A2U3P2
LinkDB
Position
2638712..2639797
AA seq 361 aa
MIKVIDKSLVKNIFTKPEDFLEYFDLVYVNDFNLSINRVKKGKTFAYQKAGAFVSDQNVL
KRIQTLVIPPMWKKVRISDLDNGHLQAVGRDAKGRKQYRYHSKWNAVRNKTKFIKMIDFG
KNLPKIRSKVNKDLEQPTWTKNKVLALIVKLLEETHIRIGNTQYAKRNKTYGITTLRTKH
LTKENNKIRFEFVGKRGKEHKITLRNKKLIKLVNQCQEIPGWKLFQYYDEDGIKKEIDSS
SVNEYIHNLCGELFTAKDFRTWSASLIAFNTLMDFGIEKEENQNKKNRLQAIDVVAKELG
NTRNVSRKYYIHPHILKTYEDSSINTYFKQVENDKKIYTNFSHSEKAMMTLLEDYNPVID
I
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgataaaagttatagataaatctcttgtaaaaaatattttcaccaagccagaagacttt
ttagagtactttgatttggtttatgtaaatgattttaatttatctataaatcgtgttaag
aaaggcaaaacctttgcttatcaaaaagcaggtgcttttgtgtcagatcaaaatgtactg
aaaagaattcaaactttggtgatacctccaatgtggaaaaaagttagaatttctgattta
gataatgggcatttacaagctgtgggcagagatgcaaaaggtagaaaacaatacagatat
cattctaaatggaatgctgtaagaaacaaaaccaagtttattaaaatgatagattttgga
aagaatctaccaaaaattagaagtaaagtaaataaggatttagaacaacctacttggact
aaaaacaaagttttggctttaattgtaaaattacttgaagaaactcatataagaattggt
aacactcaatatgcaaagcgcaataaaacctatggcattacaactttaagaacaaagcat
cttaccaaagagaataacaaaataaggtttgaatttgttggtaaaagaggtaaagaacat
aaaattacattaaggaataagaagctaattaagttggtgaatcaatgtcaagaaattcct
ggctggaagctctttcagtattatgatgaagatggaatcaaaaaggaaatagacagcagt
tctgttaatgaatacattcacaatttatgtggagaattatttacggccaaagattttaga
acgtggtctgcatctttaattgcttttaatactctaatggattttggaattgagaaagaa
gaaaatcaaaataagaaaaataggctacaagcaatagatgttgtagctaaggaattagga
aacaccagaaatgtttctcgtaaatattacatacatccccatattctaaaaacctatgag
gactctagtatcaacacttattttaagcaagtagaaaatgataagaaaatttacaccaat
ttttcacattcagaaaaagcaatgatgactttattagaagattataatcctgtaattgat
atctaa

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