Polaribacter sp. MED152: MED152_12609
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Entry
MED152_12609 CDS
T02533
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pom
Polaribacter sp. MED152
Pathway
pom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MED152_12609 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pom03021
]
MED152_12609 (rpoA)
03400 DNA repair and recombination proteins [BR:
pom03400
]
MED152_12609 (rpoA)
Enzymes [BR:
pom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MED152_12609 (rpoA)
Transcription machinery [BR:
pom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MED152_12609 (rpoA)
DNA repair and recombination proteins [BR:
pom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MED152_12609 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
EAQ40878
UniProt:
A2U3A0
LinkDB
All DBs
Position
2776931..2777923
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AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIESTDFSGRFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSLRID
GVEHEFSTVSGIVEDVTEIILNLKQVRFKKQIDETDRETVSVSISGQEQFTAGDLQKFIS
GFQVLNPDLVICNMDKSVKLNAEITIEKGRGFVPAEENKKASAPIGTIFTDSIYTPIKNV
KYAIENFRVEQKTDYEKLVFDIDTDGSINPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTRLIDMDLSVRALNCLKAAEVDTLGDLVSFNKSDLMKFRNFG
KKSLTELEELVIVKGLSFGMDLTKYKLDRD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcagaaacctgataaagtaataatgattgaatctacagatttt
tctggaagatttgagtttagacctttagagccaggttttggattaacagtaggtaatgct
ttaagaagagtattattatcttcattagaaggatttgcaattacgtcattaagaattgat
ggtgtagagcacgaattctcaacggtttcaggaatcgtagaagatgttactgaaattata
ttaaacttaaaacaagttcgttttaagaagcagattgatgaaacagatagagaaactgta
tcagtttcaatatctggtcaagagcaatttacagcaggagatttacagaagtttatttct
ggttttcaagtattgaacccagatttagtaatctgtaatatggataaatctgtaaaattg
aatgcagaaatcacaattgaaaaaggtagaggatttgtacctgcagaagaaaacaaaaaa
gcttctgcacctattggaacaatctttacagattctatttacactccaataaagaatgta
aaatatgcaattgagaactttcgtgtagagcaaaagacagattatgaaaaattagttttc
gatatcgatactgatggatcaatcaatcctaaagatgctttaacagaagctgctaaaatt
ttaattcaccattttatgttattctctgatgagcgtatcactttagaggctgatgaaatt
gcacagactgaaacatatgatgaggaatcattacatatgcgtcagttattgaaaactaga
ttaatcgatatggatttatctgtaagagctttaaattgtttaaaagctgcagaagtagat
acattaggagatttagtttcatttaacaagagtgatttaatgaagtttagaaactttgga
aaaaaatcattaacagaactagaagaattagttattgttaaaggtttaagttttggaatg
gatttaacaaaatataaattagatagagattaa
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