Pongo abelii (Sumatran orangutan): 100171435
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Entry
100171435 CDS
T01416
Symbol
DHX58
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100171435 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pon04054
]
100171435 (DHX58)
Enzymes [BR:
pon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100171435 (DHX58)
Pattern recognition receptors [BR:
pon04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100171435 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_19
DUF6825
Motif
Other DBs
NCBI-GeneID:
100171435
NCBI-ProteinID:
NP_001124599
Ensembl:
ENSPPYG00000029982
UniProt:
Q5RFN9
LinkDB
All DBs
Position
19:complement(72376785..72388412)
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AA seq
678 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDGGKVVVLVNRVHLV
TQHGEEFRRMLDGRWTMTTLSGDMGPRAGFGHLARCHDLLICTAELLQMALTSPEEEEHL
ELTAFSLIVVDECHHTHKDTVYNVIMSQYLELKLQRAQPLPQVLGLTASPGTGGASKLNG
AINHVLQLCANLDTWCIMSPQNYCPQLQEHSQQPCKQYNLCHRRSQDPFGDLLKKLMDQI
HDHLEMPELSRNFGTQMYEQQVVKLSEAAALAGLQEQRVYALHLRRYNDALLIHDTVRAV
DALAALQDFYHREHVTKTQILCAKRRLLALFDDHKNVLAHLATHGPENPKLEMLEKILQR
QFRSSDSPRGIIFTRTRQSAHSLLLWLQQQPGLQTVDIRAQLLIGAGNSSQSTHMTQRDQ
QEVIRKFRDGTLNLLVATSVAEEGLDIPHCNVVVRYGLLTNEISMVQARGRARADQSVYS
FVATEGSRELKRELINEALETLMEQAVAAVQKMDQAEYQAKIRDLQQAALTKRAAQAAQR
ENQRRQFPVEHVQLLCINCMVAVGHGSDLRKVEGTHHVNVNPSFSIYYNVSRDPVVINKV
FKDWKPGGVISCRNCGEVWGLQMIYKSVKLPALKVRSMLLETPQGRIQAKKWSRVPFSVP
DFDFLQHCAQNLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcggccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcatctggctgcccacgggtgccgggaagacccgggcggctgcttatgtggccaagagg
cacctagagactgtggatggaggcaaggtggttgtattggtcaacagggtgcacctggtg
acccagcatggtgaagagttcaggcgcatgctggatggacgctggaccatgacaaccctg
agtggggacatgggaccacgtgctggctttggccacctggcccggtgccatgacctgctc
atctgcacggcagagcttctgcagatggcactgaccagccccgaggaggaggagcacttg
gagctcactgccttctccctgatcgtggtggatgagtgccaccacacgcacaaggacacc
gtctacaacgtcatcatgagccagtacctagaacttaaactccagagggcacagccgcta
ccccaggtgctgggtctcacagcctccccaggcactggcggggcctccaagctcaatggg
gccatcaaccacgtcctgcagctctgtgccaacttggacacgtggtgcatcatgtcaccc
cagaactactgcccccagctgcaggagcacagccaacagccttgcaaacagtacaacctc
tgtcacaggcgcagccaggatccgtttggagacttgctgaagaagctcatggaccaaatc
cacgaccacctggagatgcctgagttgagccggaactttgggacgcagatgtatgagcag
caggtggtgaagttgagtgaggctgcggctttggccgggctccaggagcaacgggtgtat
gcgcttcacctgaggcgctacaatgacgcgctgctcatccatgacaccgtccgcgccgtg
gatgccttggctgcgctgcaggatttctatcacagggagcatgtcactaaaacccagatc
ctgtgtgccaagcgccggctgctggccctgttcgatgaccacaagaatgtgctggcccac
ttggcaactcatggcccagagaatccaaaactggagatgctggaaaagatcctgcaaagg
cagttcaggagctctgacagccctcggggtatcatcttcacccgcacccgccagagcgca
cactccctcctgctctggctccagcagcagccaggcctgcagaccgtggacattcgggcc
cagctactgattggggctgggaacagcagccagagcacccacatgacccagagggaccag
caagaagtgatccggaagttccgagatggaaccctgaaccttctggtggccacgagtgtg
gcggaggaggggctggacatcccacattgcaatgtggtggtgcgttatgggctcctgacc
aatgaaatctccatggtccaggccaggggccgtgcccgggccgatcagagtgtttactcg
tttgtagcaactgagggtagccgggagctgaagcgggagctgatcaacgaggcgctggag
acgctgatggagcaggcagtggctgctgtgcagaaaatggaccaggctgagtaccaggcc
aagatccgggatctgcagcaggcagccctgaccaagcgggcggcccaggcagcccagcgg
gagaaccagcggcggcagttcccagtggagcacgtgcagctactctgcatcaactgcatg
gtggccgtgggccacggcagcgacctgcggaaggtggagggcacccaccatgtcaacgtg
aaccccagcttctcgatctactataatgtctccagggatcctgtggtcatcaacaaagtc
ttcaaggactggaagcctgggggtgtcatcagctgcaggaactgtggggaggtctggggt
ctgcagatgatctacaagtcagtgaagctgccagcgctcaaagtccgcagcatgctgctg
gagacccctcaggggcggatccaggccaaaaagtggtcccgcgtgcccttctccgtgcct
gactttgacttcctgcagcattgtgcccagaacctgtcagacctctccctggactga
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