Pongo abelii (Sumatran orangutan): 100171499
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Entry
100171499 CDS
T01416
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X4
KO
K16474
intraflagellar transport protein 88
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pon03037
]
100171499 (IFT88)
Cilium and associated proteins [BR:
pon03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
100171499 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_7
TPR_8
TPR_14
TPR_16
TPR_6
ANAPC3
TPR_11
ARM_TT21_4th
TPR_17
TPR_10
TPR_9
TPR_CcmH_CycH
TPR-S
ARM_TT21_C
TPR_21
TPR_15
ARM_TT21_2nd
HEAT_Nup120
DUF6584
HAT_PRP39_C
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
100171499
NCBI-ProteinID:
XP_024113457
Ensembl:
ENSPPYG00000005193
LinkDB
All DBs
Position
14:22291469..22425315
Genome browser
AA seq
834 aa
AA seq
DB search
METFQKREVQMMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRP
PITAKISSTAVTRPIATGYGSKTSLASSIGRPMTGAIQDGVTRPMTAVRAAGFTKAALRG
SAFDPLSQSRGPAPPLEAKKKDSPEEKIKQLEKEVNELVEESCIANSCGDLKLALEKAKD
AGRKERVLVRQREQVTTPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFS
NAGILKMNMGNIYLKQRNYSKAIKFYRMALDQVSSVNNQMRIKIMQNIGVTFIQAGQYSD
AINSYEHIMSMAPNLKAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDP
HTNLVTEAIKNDHLRQMEHERRAMAEKYIMTSAKLIAPVIETSFAAGYDWCVEVVKASQY
VELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSALYYMGKDFAQAS
SYADIAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYEK
LNRLDEALDCFLKLHAILRNSAEVLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLS
KLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQ
PTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKDAQEYA
RKLKRLEKMKEIREQRIKSGRDGSGGSRGKREGSASSDSGQNYSASSKGERLNARLRALP
GTNEPYESSSNKEIDASYVDPLGPQIERPKTAAKKRIDEDDFADEELGDDLLPE
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggaaacattccaaaaacgtgaagtacaaatgatgcaaaatgtgcacctggctccagag
acagatgaagatgatctttattccggctataatgactacaatccaatctatgatatcgag
gaattggagaatgatgcagcttttcagcaagctgtgaggactagtcatggcagaagacct
ccaataactgctaaaatatcaagcacggcagttactagacctatagctactggatatggg
tccaagacatctctggcatcatcaataggaagaccaatgacaggggctattcaggatgga
gttactagacccatgacagcagtgagagcagctggttttaccaaagcagctttgagaggc
tctgcatttgacccccttagtcagtcaaggggccctgctccccctttggaagccaagaaa
aaagatagcccagaggaaaaaataaagcaattagagaaggaagtaaatgaattggtagaa
gaaagctgtattgccaatagttgtggagacttaaaattggccttagaaaaggcaaaagat
gcgggaagaaaagagagagtcctggtgagacagcgagaacaagttacaactccagaaaat
atcaatttggatttaacttactcagttcttttcaatttggccagtcagtattcagttaat
gaaatgtatgccgaagcacttaacacttatcaagttatagtgaaaaataagatgtttagc
aacgcaggaatattgaaaatgaatatgggaaatatctatttaaagcaaagaaattattcc
aaagccattaaattctaccgaatggcattagaccaagtttcaagtgtcaataatcaaatg
aggattaaaataatgcagaacattggagttacatttattcaggctggtcagtattcagat
gctattaattcatatgagcacataatgagcatggcaccaaatctgaaggcaggctacaac
ctaactatctgttattttgctgttggagaccgagaaaaaatgaagaaggcattccaaaaa
ttgattgctgttccattagaaattgatgaagataaatatatttcaccaagtgatgatcct
catactaacttagtaactgaagctataaaaaatgatcacctcaggcaaatggaacatgaa
aggagagccatggcagaaaaatacattatgacatctgcaaaactcattgctcctgtaatt
gaaacatcttttgctgcaggttatgattggtgcgtggaagtggtgaaagcttctcaatat
gtagagctagccaatgatctggaaataaacaaagcagttacatacttgagacaaaaagac
tataaccaagctgtagagatcttaaaagtgttggaaaaaaaggatagtagagtgaaaagt
gcagctgcaaccaatctctcagccctgtattatatgggaaaggattttgcacaagccagc
agctatgcagatatagctgtgaactctgatagatacaatccagcagctcttactaataaa
gggaatacagtttttgcaaatggtgattatgagaaggccgctgaattctataaagaggct
ctaagaaatgattcttcttgtactgaagcactttataatattggccttacctatgagaaa
ctaaatcggctagatgaggctttggactgtttcctgaagcttcacgcaatcctacgaaac
agtgctgaagttctttaccagatagcaaatatatatgaattaatggaaaatcccagtcaa
gctattgaatggctaatgcaggtggtcagtgttattccaaccgatcctcaagttttatct
aaactaggagaattatatgatcgcgaaggagataaatctcaagcatttcaatattactat
gagtcatataggtattttccttgtaatattgaagtcattgagtggcttggagcctattac
attgacacccaattttgggaaaaagctattcagtactttgaaagagcttctcttatacag
cctacacaagtgaaatggcagctgatggtagctagttgtttcagaagaagtggtaactac
caaaaagcattagatacttataaagatactcacagaaaatttccagaaaatgttgaatgt
ctgcgtttcttggttcgtctctgcacagatcttggattaaaagatgctcaggaatatgcc
agaaaactgaagaggttggaaaaaatgaaagaaataagggaacagcgcataaagtcaggc
agagatggcagtgggggctcccgtggcaaaagagaaggaagtgctagcagtgacagtggc
cagaactatagtgccagtagtaaaggtgaacgactaaatgccagactcagagctttacct
gggacaaatgaaccttatgaaagtagcagtaacaaagaaatagatgcgtcctatgtggac
ccacttggccctcaaatagaaagaccaaaaactgcagccaaaaaaaggattgatgaggat
gattttgctgatgaagaattaggagatgatttgcttccagaataa
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