Pongo abelii (Sumatran orangutan): 100171613
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Entry
100171613 CDS
T01416
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein
KO
K13203
zinc finger RNA-binding protein
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100171613 (ZFR)
Spliceosome [BR:
pon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100171613 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
100171613
NCBI-ProteinID:
NP_001124762
Ensembl:
ENSPPYG00000015378
UniProt:
Q5REX3
LinkDB
All DBs
Position
4:complement(32907586..32997674)
Genome browser
AA seq
1074 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAAAAAAQYSQQPASGVAYSHPTT
VASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGY
TQRQQEAPPPPPPATTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPS
VAETYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAA
ATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAAT
AAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEA
ALKASQNASSSNNSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPI
PSTEPNVVSQATSSTAVSASKPTASPSSIAANNCTVNTSSIATSSMKGLTTTGNSSLNST
SNTKVSAVPTNMAAKKTSTPKINFVGGNKLQSTGNKTEDIKGTECVKSTPVTSAVQIPEV
KQDTVSEPVTPASLAVLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMH
LKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQREEYWRRREEEERWRMEMR
RYEEDMYWRRMEEEQHHWDDRRRMPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPD
SSDDRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSLSEHEKNKNKEGDDKKEGS
KDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKTLLSRIAENLPKQLAVISPEKY
DIKCAVSEAAIILNSCVEPKMQVTITLTSPIIREENMREGDVTSGMVKDPPDVLDRQKCL
DALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASS
PQSPGDALRRVFECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRL
LAFRQIHKVLGMDPLPQMSQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgccctgtagtttctttcacctatgtgcccagccggctgggggaagat
gccaaaatggcgaccggcaactactttggattcacccacagcggggcggcggcggcggcg
gctgcggcccaatatagccagcagccagcttcgggtgtagcctattctcatccaactaca
gttgctagctacactgtccatcaggctccagtagctgctcacacagttactgctgcctat
gcaccagcagccgccacagttgcagttgccaggcctgctccagtagctgttgcagctgct
gcaacagctgctgcttatggaggctaccccactgcacacacggcaactgactatggttat
actcagaggcaacaagaagcaccaccaccaccacccccagctactacacaaaactaccag
gattcatactcatatgtaaggtccacggctcctgctgtagcttatgatagtaagcaatac
taccaacaaccaacagcaactgctgctgctgtagctgccgctgcccaacctcagccttct
gttgctgaaacttactatcagacagcccccaaagcaggttacagccaaggtgcaactcag
tatactcaagcccagcaaactcgacaagtgacagccataaaaccagccacaccaagtcca
gctaccactactttctccatctatcctgtatcctccaccgtacagccagtagcagctgcg
gctactgtggtgccatcctatactcagagtgctacttacagtaccacagcagttacttat
tctggtacgtcttattcaggttacgaagcagcagtgtattcagctgcatcttcctactat
caacagcagcagcagcaacagaagcaggcagcagcagcagctgctgctgctgctgcaaca
gctgcctggacagggaccacctttactaaaaaagcaccattccaaaataaacaactgaaa
ccaaaacagcctcccaaaccgccacagattcactattgtgatgtttgtaagatcagctgt
gctggaccacagacttataaagaacatttagaaggacagaaacataaaaaaaaagaagct
gcattgaaagcctcacaaaatgccagcagcagcaacaattctactcgtgggactcaaaat
cagctacgttgtgagctctgcgatgtgtcttgtacaggagcagatgcatatgctgcccac
attcgtggtgctaagcatcagaaagtggttaagttacacacaaaacttggtaaacccatt
ccatcaacagaaccaaacgttgttagtcaagctacttcttcaacagctgtatctgcttca
aagccgactgcctctccttcaagcattgcagcaaacaattgtactgtgaatacgtcatca
attgcaacgtcttcaatgaagggtcttacgactacaggaaactcgtctcttaatagcaca
tctaacactaaagtatcagcagtgcctacaaatatggctgccaagaaaacatctaccccc
aaaataaattttgttggtggtaataagctgcagtcaacaggaaataaaacagaagacata
aaaggaaccgaatgtgttaaaagtactcctgtcacttctgctgtgcagattcctgaagta
aagcaagacacagtgtcagaaccagtcacacctgcatctcttgctgttttacagagtgat
gtgcagccagtgggccatgattatgtggaagaggtacgaaacgatgaaggaaaagtaatt
cgcttccattgtaaattatgtgagtgcagctttaatgatcccaatgctaaggagatgcac
ttaaaagggcgaagacacagacttcaatataaaaaaaaagtaaatccagatttgcaagta
gaagtaaagcctagtattcgagcaagaaagattcaagaagagaaaatgaggaagcaaatg
cagagggaggagtactggcgaagacgagaagaagaggagcgttggagaatggaaatgaga
cgttatgaagaggacatgtactggagaagaatggaggaagaacaacatcattgggatgat
cgccgccgaatgccagatggaggttatcctcatggtcctccaggcccattaggccttctg
ggagtccgaccaggcatgcctcctcagcctcaggggcctgcacccttacgtcgtcctgac
tcatctgatgaccgttatgtaatgacaaaacatgccaccatttatccaactgaagaggag
ttacaggcagttcagaaaattgtttctattactgaacgtgctttaaaactcgtttcagac
agtttgtctgaacatgagaagaacaagaacaaagagggagatgataagaaagagggcagt
aaagacagagctttgaaaggagttttgcgagtgggagtattggcaaaaggattacttctc
cgaggagatagaaatgtcaaccttgttttgctgtgctcagagaaaccttcaaagacatta
ttaagccgtattgcagaaaacctacccaaacagcttgctgttataagccctgagaagtat
gacataaaatgtgctgtatctgaagcggcaataattttgaattcatgtgtggaacccaaa
atgcaagtcactatcacactgacatctccaattattcgagaagagaacatgagggaagga
gatgtaacctcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgcctt
gacgctctggctgctctacgccacgctaagtggttccaggctagagctaatggtctgcag
tcctgtgtgattatcatacgcattcttcgagacctctgtcagcgagttccaacttggtct
gattttccaagctgggctatggagttactagtagagaaagcaatcagcagtgcttctagc
cctcagagccctggggatgcactgagaagagtttttgagtgcatttcttcagggattatt
cttaaaggtagtcctggacttctggatccttgtgaaaaggatccctttgataccttggca
acaatgactgaccagcagcgtgaagacatcacatccagtgcacagtttgcattgagactc
cttgcattccgccagatacacaaagttctaggcatggatccattaccgcaaatgagccaa
cgttttaacatccacaacaacaggaaacgaagaagagatagtgatggagttgatggattt
gaagctgaggggaaaaaagacaaaaaagattatgataacttttaa
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