Pongo abelii (Sumatran orangutan): 100171694
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Entry
100171694 CDS
T01416
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100171694 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pon04121
]
100171694 (TRIM54)
Ubiquitin system [BR:
pon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100171694 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
PHP
DUF349
Sina_RING
CoiA_N
COG2_C
DD_DDX21-DDX50
MIF4G_like_2
UvrD_C
Zn_ribbon_FGT1_2
DUF5799
GH123_cat
FlgN
DUF1421
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
100171694
NCBI-ProteinID:
NP_001124836
Ensembl:
ENSPPYG00000031097
UniProt:
Q5REJ9
A0A2J8VN07
LinkDB
All DBs
Position
12:complement(105479811..105505996)
Genome browser
AA seq
358 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
EKLQRVRGLIRQYGDHLEASSKLVETAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEEEEVAPDGDEGSAGQEEERPDGP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccagtggtgatcctg
ccctgccaacacaacctgtgccgcaagtgtgccaacgacgtcttccaggcctcgaatcct
ctgtggcagtcccggggctccaccactgtgtcttcaggaggccgtttccgctgcccatcg
tgcaggcatgaggttgtcctggacagacatggtgtctacggcctgcagcgaaacctgcta
gtggagaacattatcgacatttacaagcaggagtcgtccaggccactgcactccaaggct
gagcagcacctcatgtgcgaggagcatgaagaggagaagatcaatatctactgcctgagc
tgtgaggtgcccacctgctctctctgcaaggtctttggtgcccacaaggactgtgaggtg
gctccactgcccaccatttacaaacgccagaagagtgagctcagcgatggcatcgcgatg
ctggtggcaggcaatgaccgtgtgcaagcagtgatcacgcagatggaggaggtgtgccag
accatcgaggacaatagccggaggcagaagcagttgttaaaccagaggtttgagagcctg
tgcgcagtgctggaggagcgcaagggtgagctgctgcaggcgctggcccgggagcaagag
gagaagctgcagcgcgtccgcggcctcatccgtcagtatggcgaccacctggaggcctcc
tctaagctggtggagactgccatccagtccatggaagagccacaaatggcgctctacctc
cagcaggccaaggagctgatcaataaggtcggggccatgtcgaaggtggagctggcaggg
cggccggagccaggctatgagagcatggaacaattcaccgtgagcgtggagcacgtggcc
gaaatgctgcggaccatcgatttccagccaggcgcttccggggaggaagaggaggtggcc
ccggacggagacgagggcagcgcggggcaggaggaagagcggccggatgggccttaa
DBGET
integrated database retrieval system
