Pongo abelii (Sumatran orangutan): 100171805
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Entry
100171805 CDS
T01416
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13
KO
K08331
autophagy-related protein 13
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04136
Autophagy - other
pon04140
Autophagy - animal
pon04211
Longevity regulating pathway
pon05010
Alzheimer disease
pon05014
Amyotrophic lateral sclerosis
pon05016
Huntington disease
pon05017
Spinocerebellar ataxia
pon05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100171805 (ATG13)
04136 Autophagy - other
100171805 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100171805 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100171805 (ATG13)
05014 Amyotrophic lateral sclerosis
100171805 (ATG13)
05016 Huntington disease
100171805 (ATG13)
05017 Spinocerebellar ataxia
100171805 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
100171805 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pon04131
]
100171805 (ATG13)
03029 Mitochondrial biogenesis [BR:
pon03029
]
100171805 (ATG13)
Membrane trafficking [BR:
pon04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100171805 (ATG13)
Atg1 complex
100171805 (ATG13)
Mitochondrial biogenesis [BR:
pon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100171805 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100171805
NCBI-ProteinID:
NP_001124934
Ensembl:
ENSPPYG00000003320
UniProt:
Q5RE28
A0A2J8WF62
LinkDB
All DBs
Position
9:complement(20465414..20523623)
Genome browser
AA seq
517 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
IYPSVEDSQEVCTTSFSTSPPSQLSSSRLSYQPAALGVGSADLAYPVVFAAGLNATHLHQ
LMVPGKEGGVPLAPNQPVHGTQADQERLATCTPSDGTHCAATPSSSEDTETVSNSSEGRA
SPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMFAPKNLELEDTDPMVNPPDSPETE
SPLQGSLHSDGSSGGSSGNTHDDFVMIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLS
IDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETLQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcggcttggtgaaaagatttgcactcgt
tcatcatcttctccaacgggttcagattggttcaacttagcaatcaaagacatcccagag
gttacacatgaggcaaagaaggcactggcagggcaactgcctgcggtcgggaggtccatg
tgtgtggagatttcacttaagacttctgagggagattccatggagctggaaatatggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacggtgtacaacaga
ctgtcattgctgctgaagtctcttcttgctataactagggtgacaccagcctataggctc
tccagaaaacaagggcatgaatatgtcatattatacaggatatattttggagaagttcag
ctgagtggcttaggagaaggcttccagacagttcgtgttgggacagtgggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagctcctctcccatgcacccctgcaattacagaactgctggtgaggacactggagta
atatacccgtctgtagaagactctcaagaagtgtgtaccacctctttttccacctccccg
ccatcccagctctcaagctctcgcctttcctatcagcctgctgccctgggcgttggatca
gctgacctggcttatccagtagtgtttgctgctggcttaaatgctacacaccttcaccag
ctgatggttcctgggaaggaaggtggggtaccccttgctcccaaccagcctgtccatggt
acccaggctgaccaggagagactggcaacctgcaccccttctgacggaacccactgtgct
gccacaccctccagtagtgaggatactgaaaccgtatcaaacagcagcgaaggacgggcc
tcccctcacgatgtgttggagaccatctttgtccgaaaagtgggggcttttgtcaacaaa
cccattaaccaggtgaccctgacgagtttggatataccctttgccatgtttgctcccaag
aatttggagctggaggataccgatccaatggtgaatcctccagattccccagagactgaa
tctcctctccagggcagcctgcactcagatggctccagcgggggcagcagtggcaatacc
catgatgactttgttatgatagactttaaaccagctttttctaaagatgacattcttccg
atggacctggggaccttctatcgggagtttcagaacccacctcagctgagcagcctctcc
atagatattggagcacagtccatggctgaagacttggactcattaccagagaagctggct
gtgcatgagaagaatgtccgcgagtttgatgcctttgtggaaaccctgcagtaa
DBGET
integrated database retrieval system
