Pongo abelii (Sumatran orangutan): 100171974
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Entry
100171974 CDS
T01416
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100171974 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100171974 (PRPF38A)
Spliceosome [BR:
pon03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100171974 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
100171974 (PRPF38A)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
100171974
NCBI-ProteinID:
NP_001125092
Ensembl:
ENSPPYG00000001348
UniProt:
Q5RDD2
A0A2J8V8P3
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All DBs
Position
1:complement(180830863..180845184)
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AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccgtacagtgaaggatgcgcacagcatccacggcaccaaccctcaatatctg
gtggagaagatcattcgaacgcgaatctatgagtccaagtactggaaagaggagtgcttt
ggacttacggctgaacttgtagtcgataaagccatggagttaaggtttgtgggtggcgtc
tatggtggcaacataaaaccaacaccctttctgtgtttaaccttgaagatgcttcaaatt
cagccggagaaggatatcattgtagagtttatcaaaaatgaagatttcaagtatgtccgc
atgctgggggcactttacatgaggctgacaggcactgcaattgattgctacaagtacttg
gagcctttgtacaatgactatcgaaaaatcaagagccagaaccgaaatggggagtttgaa
ttgatgcatgttgatgagtttattgatgaactattgcacagtgagagagtctgtgatatc
attctgccccgactacagaaacgctatgtattagaggaagctgagcaactggagcctcga
gttagtgctctggaagaggacatggatgatgtggagtccagtgaagaggaagaagaggag
gatgagaagttggaaagagtgccatcacctgatcaccgccggagaagctaccgagacttg
gacaagccccgtcgctctcccacactgcgctacagaaggagtaggagccggtctcccaga
aggcggagtcgatctcccaaaaggagaagcccctcccctcgccgagaaaggcatcggagc
aagagtccaagacgtcaccgcagcaggtcccgagatcggcggcacagatcccgttccaag
tcaccaggtcatcaccgtagtcacagacacaggagccactcaaagtctcccgaaaggtct
aagaagagccacaagaagagccggagagggaatgagtaa
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