Pongo abelii (Sumatran orangutan): 100172084
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Entry
100172084 CDS
T01416
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100172084 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pon03019
]
100172084 (PNPT1)
03016 Transfer RNA biogenesis [BR:
pon03016
]
100172084 (PNPT1)
Enzymes [BR:
pon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
100172084 (PNPT1)
Messenger RNA biogenesis [BR:
pon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
100172084 (PNPT1)
Transfer RNA biogenesis [BR:
pon03016
]
Prokaryotic type
tRNA degradation factors
100172084 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
100172084
NCBI-ProteinID:
NP_001125193
Ensembl:
ENSPPYG00000012399
UniProt:
Q5RCW2
H2P660
LinkDB
All DBs
Position
12:76693084..76751143
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AA seq
703 aa
AA seq
DB search
MVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRREIGTSDKEILTSRIIDRSIRP
LFPAGYFYDTQVLCNLLAVDGVNEPDVLAINGASVALSLSDIPWNGPVGAVRIGIIDGEC
VVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQDFCHAIKVGVKYTQQIIQGIQ
QLVKETGVTKRTPQKLFTPSPEIVKHTHKLAMERLYAVFTDYEHDKVSRDEAVNKIRLDT
EEQLKEKFPQADPYEIIESFNVVAKEVFRNIILNEYKRCDGRDLTSLRNVSCEVDMFKTL
HGSALFQRGQTQVLCTVTFDSLESGIKSDQVITAINGIKDKNFMLHYEFPPYATNEIGKV
TGLNRRELGHGALAEKALYPVIPRDFPFTIRVTSEVLESNGSSSMASACGGSLALMDSGV
PISSAVAGVAIGLVTKTDPEKGEIEDYRLLTDILGIEDYNGDMDFKIAGTNKGITALQAD
IKLPGIPIKIVMEAIQQASVAKKEILQIMNKTISKPRTSRKENGPVVETVQVPLSKRAKF
VGPGGYNLKKLQAETGVTISQVDEETFSVFAPTPSALHEARDFITEICKDDQEQQLEFGA
VYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIRHPTALGLEVGQEIQVKYFGRDP
ADGRMRLSRKVLQSPATTVVRTLNDRSSIVMGEPISQSSSNSQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagcagtcagtaaaacaaaaccttcgccttcccagtttatgcctttggtggtt
gactacagacaaaaagctgctgcagcaggtagaattcccacaaactatctgagaagagag
attggtacttctgataaagaaattcttacaagtcgaataatagatcgttcaattagaccg
ctctttccagctggctacttctatgatacacaggttctgtgtaatctgttagcagtagat
ggtgttaatgagcctgatgtcctagcaattaatggcgcttccgtagccctctcattatca
gatattccctggaatggacctgttggggcagtacgaataggaataattgatggagaatgt
gttgttaacccaacaagaaaagaaatgtcttctagtactttaaatttagtggttgctgga
gcacctaaaagtcagattgtcatgttggaagcctctgcagagaacattttacagcaggac
ttttgccatgctatcaaagtgggagtgaaatatacccaacaaataattcagggcattcag
cagttggtaaaagaaactggtgttaccaagaggacacctcagaagttatttaccccttcg
ccagagattgtgaaacatactcataaacttgctatggagagactctatgcagtttttaca
gattacgagcatgacaaagtttccagagatgaagctgttaacaaaataagattagatacg
gaggaacaactaaaagaaaaatttccacaggccgatccatatgaaataatagaatccttc
aatgttgttgcaaaggaagtttttagaaatattattttgaatgaatacaaaaggtgcgat
ggtcgggatttgacttcacttaggaatgtaagttgtgaggtagatatgtttaaaaccctt
catggatcagcattatttcaaagaggacaaacacaggtgctttgtaccgttacatttgat
tcattagaatctggtattaagtcagatcaagttataacagctataaatgggataaaagat
aaaaatttcatgctgcactatgagtttcctccttatgcaactaatgaaattggcaaagtc
actggtttaaatagaagagaacttgggcatggtgctcttgctgagaaagctttgtatcct
gttattcccagagattttcctttcaccataagagttacatctgaagtcctagagtcaaat
gggtcatcttctatggcatctgcatgtggcggaagtttagcattaatggattcaggggtt
ccaatttcatctgctgttgcaggcgtagcaataggattggtcaccaaaaccgatcctgag
aagggtgaaatagaagattatcgtttgctgacagatattttgggaattgaagattacaat
ggtgacatggacttcaaaatagctggcactaataaaggaataactgcattacaggctgat
attaaattacctggaataccaataaaaattgtaatggaggctattcaacaagcttcagtg
gcaaaaaaggagatattacagatcatgaacaaaactatttcaaaacctcgaacatctaga
aaagaaaatggacctgttgtagaaactgttcaggttccattatcaaaacgagcaaaattt
gttggaccaggtggatataacttaaaaaaacttcaggctgaaacaggtgtaactattagt
caggtggatgaagaaacgttttctgtatttgcaccaacacccagtgctttgcatgaggca
agagacttcattactgaaatctgcaaggatgatcaagagcagcaattagaatttggagca
gtgtataccgccacaataactgagatcagagatactggtgtaatggtaaaattatatcca
aatatgactgcggtactgcttcataacacacagcttgatcaacgaaagattagacatcct
actgccctaggattagaagttggccaagaaattcaggtgaaatactttggacgtgaccca
gccgatggaagaatgaggctttctcgtaaagtgcttcagtcaccagctacaactgtggtc
agaactttgaatgacagaagtagtattgtaatgggagaacctatttcacagtcatcatct
aattctcagtga
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