Pongo abelii (Sumatran orangutan): 100172241
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Entry
100172241 CDS
T01416
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
pon
Pongo abelii (Sumatran orangutan)
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pon03041
]
100172241 (RBM39)
Spliceosome [BR:
pon03041
]
Common components
Common spliceosomal components
General mRNP proteins
100172241 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
100172241
NCBI-ProteinID:
NP_001125339
Ensembl:
ENSPPYG00000010963
UniProt:
Q5RC80
A0A2J8VJA4
LinkDB
All DBs
Position
21:complement(39867170..39906512)
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AA seq
524 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCF
QLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIA
AVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgccaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaagagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaagaaaacgaagtagaagcaaagagaggcga
cggagccgctcaagaagtcgagatcgaagatttagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatttaactcctgaggaaagagatgcaaggacagtcttctgtatgcagctg
gcggcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgacagaaattcaagacgttccaagggaattgcttatgtggag
ttcgtcgatgttagctcagtgcctctagcaataggattaactggccaacgagttttaggc
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctttatgtgggctcattacacttcaac
ataactgaagatatgcttcgtgggatctttgagccttttggaaggattgaaagtatccag
ctgatgatggacagtgaaactggtcgatccaagggatatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggaacaacttaatggatttgaactagcaggaagacca
atgaaagttggtcatgttactgaacgtactgatgcttcgagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtcttcagttaatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacagcaagctctacag
atgagtggctctttggcatttggtgctgtggcagatttgcaaacaagactttcccagcag
actgaagcttcagctttagctgcagctgcctctgttcagccacttgcaacacaatgtttc
caactctctaacatgtttaaccctcaaacagaagaagaagttggatgggataccgagatt
aaggatgatgtgattgaagaatgtaataaacatggaggagttattcatatttatgttgac
aaaaattcagctcagggcaatgtgtatgtgaagtgcccatcaattgctgcagctattgct
gctgtcaatgcattgcatggcaggtggtttgctggtaaaatgataacagcagcatatgta
cctcttccaacttaccacaacctgtttcctgattctatgacagcaacacaactactggtt
ccaagtagacgatga
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