Pongo abelii (Sumatran orangutan): 100172409
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Entry
100172409 CDS
T01416
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100172409 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pon03021
]
100172409 (SF3B3)
03041 Spliceosome [BR:
pon03041
]
100172409 (SF3B3)
03036 Chromosome and associated proteins [BR:
pon03036
]
100172409 (SF3B3)
Transcription machinery [BR:
pon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100172409 (SF3B3)
Spliceosome [BR:
pon03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100172409 (SF3B3)
Complex B
100172409 (SF3B3)
Complex C
U2 SnRNP specific factors
100172409 (SF3B3)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100172409 (SF3B3)
TFTC complex
100172409 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
100172409
NCBI-ProteinID:
NP_001125500
Ensembl:
ENSPPYG00000007539
UniProt:
Q5RBI5
LinkDB
All DBs
Position
18:complement(73266248..73314543)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSETAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGSGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
EDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALRDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVTKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacttaaccttgcagagagccactggcatcagctttgccattcatgga
aacttttctggaaccaaacaacaagaaattgttgtttcccgtgggaagatcttggagctg
cttcgcccagaccccaacactggcaaagtacataccctactcactgtggaagtattcggt
gttatccggtcactcatggcctttaggctgacaggtggcaccaaagactacattgtagtt
ggcagtgactctggtcgaattgttatcttggaataccagccatctaagaatatgtttgag
aagattcaccaagaaacctttggcaagagtggatgccgtcgcatcgttcctggccagttc
ttagctgtggatcccaaagggcgagccgttatgattagtgccattgagaaacagaaattg
gtgtatattttgaacagagatgctgcagcccgacttaccatttcatctcccctggaagcc
cacaaagcaaacactttagtgtatcatgtagttggagtagatgtcggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcagctaatacccagcagacacttactttctatgagctagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacacggcaacttccttattacagttccagga
gggtcagatggtccaagtggagtactgatctgctctgaaaactatattacttacaagaac
tttggtgaccagccagatattcgctgtccaattcccaggaggcggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgcaacccataaaaccaaatcgatgttcttc
tttttggctcaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtacccgttgctgctgccatgtgt
gtgcttaaaacagggttcctttttgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatcagccatgcctctggaa
gaaggagacacattcttttttcagccaagaccacttaaaaaccttgtgctggttgatgag
ttggacagcctctctcccattctgttttgccagatagctgatctggccaatgaagatact
ccacagttgtatgtggcctgtggtaggggaccccgatcatctctgagagtcctaagacat
ggacttgaggtgtcagaaacggctgtttctgagctacccggtaaccccaatgctgtctgg
acagtgcgtcgacacattgaagatgagtttgatgcctacatcattgtgtctttcgtgaat
gccaccctggtgttgtccattggagaaactgtagaagaagtgactgactccgggttcctg
gggaccaccccgaccttgtcctgctccttattaggagatgatgccttggtgcaggtctat
ccagatggcattcggcacatacgagcagacaagagagtcaatgagtggaagacccctgga
aagaaaacaattgtgaagtgtgcagtgaaccagcgacaagtggtgattgccctgacagga
ggagagctggtctatttcgagatggatccttcaggacagctgaatgagtacacagaacgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaatgtgccccctggagagcag
cggtctcgcttcctggctgtggggcttgtggacaacactgtcagaatcatctccctggat
ccctcagactgtttgcaacctctaagcatgcaggctctcccagcccagcctgagtccttg
tgtatcgtggaaatgggtgggactgagaagcaggatgagctgggtgagaggggctcgatt
ggcttcctatacctgaatattgggctacagaacggtgtgctgctgaggactgtcttggac
cctgtcactggggatttgtctgacactcgcactcggtacctggggtcccgtcctgtgaag
ctcttccgagtccgaatgcaaggccaggaggcagtattggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgcttccatctcacccccctgtcttacgagacactggaa
tttgcatcgggttttgcctcggaacagtgtcccgagggcattgtggccatctccaccaac
accctacggattttggcgttagaaaagctcggtgctgtcttcaatcaagtagccttccca
ctgcagtacacacccaggaaatttgtcatccaccctgagagtaacaaccttattatcatt
gaaacggaccacaatgcctacactgaggccacaaaagctcagagaaagcagcagatggca
gaggaaatggtggaagcagcaggggaggatgagcgggagttggccgcagagatggcagca
gcattcctcaatgaaaacctccctgaatccatctttggagctcctaaggctggcagtggg
cagtgggcctctgtgatccgggtgatgaatcccattcaggggaacacactggaccttgtg
cagctggaacagaatgaggcagcttttagtgtggctgtgtgcaggttttccaacactggt
gaagactggtatgtgctggtgggtgtggccaaggacctgatactaaacccccgatctgtg
gcagggggcttcgtctatacttacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagactcctgtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagctgttgcgtgtctatgacctgggaaagaagaagttactccgaaag
tgtgagaataagcatattgccaattatatctctgggatccagactattggacatagggta
attgtatctgacgtccaagaaagtttcatatgggttcgctacaagcgtaatgaaaaccag
cttatcatctttgctgatgatacctacccccgatgggtcactacagccagcctcctggac
tatgacactgtggctggggcagacaagtttggcaacatatgtgtggtgaggctcccacct
aacaccaacgatgaagtagatgaggaccctacaggaaacaaagccctgcgggaccgtggc
ttgctcaatggggcctcccagaaggcagaggtgatcatgaactaccatgttggggagacg
gtgctgtccttacagaagaccacgctgatccctggaggctcagaatcacttgtctatacc
accttgtctggaggaattggcatccttgtgccattcacgtcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctgcggtctgaacatccccctctctgtgggcgggaccac
ctcagctttcgctcctactacttccctgtgaagaatgtgattgatggagacctctgtgag
cagttcaattccatggaacccaacaaacaaaagaacgtctctgaagaactggaccgaacc
ccacccgaggtgaccaagaaactcgaggatatccggacccgctacgccttctga
DBGET
integrated database retrieval system
