KEGG   Pongo abelii (Sumatran orangutan): 100172554
Entry
100172554         CDS       T01416                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    100172554 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pon03400]
    100172554 (WDR48)
DNA repair and recombination proteins [BR:pon03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     100172554 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IP5PC_F WDR54 Beta-prop_DCAF4 WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 100172554
NCBI-ProteinID: NP_001125636
Ensembl: ENSPPYG00000014001
UniProt: Q5RAW8 A0A2J8WY57
LinkDB
Position
2:complement(115417834..115461704)
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLG
TIIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNDAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSTVNKWILKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEDEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHVN
PMDEEENEVNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHASSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcccatcaccggcagaacacagcagggcggaggaaagtgcaggtttcctatgtt
attcgagatgaagtggagaagtacaaccgaaatggagtcaatgctctgcagctggatcca
gcactaaatagacttttcacagccggtcgagactctatcataagaatatggagtgtcaat
cagcacaagcaagatccgtatatagcatctatggaacaccatactgattgggtaaacgac
attgtactctgttgtaatgggaaaacactaatatctgcttcttctgacacgacagtaaaa
gtatggaatgcacacaagggattttgcatgtcaacattaaggacacataaggattacgta
aaggccttagcatatgccaaggataaagaactagtagcatcagctgggttggacagacaa
atattcctttgggatgtgaatactctaacagcattgactgcctcaaataacactgtcaca
acttcttctttaagtggaaacaaagattccatttatagcctggccatgaatcaactggga
acaatcattgtatcagggtccactgaaaaggtgttaagggtatgggatccaagaacatgt
gcaaaactaatgaagcttaaagggcacacggataatgtgaaggcattgctgttaaacaga
gatggcacgcaatgcctttcaggcagttctgatgggacaattcgcctttggtcccttggc
cagcagagatgtatagcaacataccgagttcatgatgaaggtgtttgggcgttgcaagtc
aatgatgccttcacacatgtgtattctggtggaagggacaggaagatttattgtacagac
ctaagaaaccctgacattcgggtgctaatttgtgaagaaaaagcaccagttctcaagatg
gagcttgatagatcagctgatcctcctcctgcaatttgggttgcaacaactaagtctaca
gtaaataaatggattttgaaaggaattcataattttagagcctctggagattatgacaat
gactgtacaaatcctataacacctctttgtacacagcctgaccaggttattaaagggggt
gctagtattattcagtgccacattcttaatgataagagacatatattaaccaaagatacc
aataataatgtggcatattgggatgtattgaaggcatgtaaagttgaagatctgggcaaa
gtggattttgaagatgaaattaagaaaagatttaaaatggtgtatgtgccaaattggttc
tcagtagacttaaaaacagggatgttaactattactttggatgaaagtgattgttttgct
gcctgggtttctgcaaaagatgctggtttcagcagccctgatgggtcagatccaaaattg
aatttaggaggacttttactccaagcactcctggaatattggcctagaacacatgtgaat
ccaatggatgaagaggaaaatgaagtaaaccatgtaaatggggagcaggagaaccgagtg
cagaagggaaatggatattttcaagtgcccccccacacacccgtgatctttggtgaagct
ggaggtcgcacactgttcaggctgctctgccgagattccgggggtgagactgagtctatg
cttcttaatgaaacagtgccacaatgggtaattgacatcactgtggataaaaatatgccc
aaattcaacaaaattcctttctaccttcaacctcatgcatcttcaggagcaaaaacctta
aaaaaagatagactctctgctagtgacatgctccaagtccgaaaagttatggaacatgtt
tatgaaaaaattatcaacttggataatgagtctcaaaccactagctcttctaataatgaa
aaaccaggagaacaggaaaaagaagaagatattgctgtgttggcagaggagaaaattgaa
cttttgtgccaggaccaggttttggatccaaatatggaccttcgaacagtgaaacacttc
atatggaagagcggtggagacctcaccctccattaccgtcagaagtccacgtga

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