Pongo abelii (Sumatran orangutan): 100172603
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Entry
100172603 CDS
T01416
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04659
Th17 cell differentiation
pon04710
Circadian rhythm
pon05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100172603 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
100172603 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
100172603 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pon03000
]
100172603 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pon03310
]
100172603 (RORC)
Transcription factors [BR:
pon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100172603 (RORC)
Nuclear receptors [BR:
pon03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100172603 (RORC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PX
Motif
Other DBs
NCBI-GeneID:
100172603
NCBI-ProteinID:
NP_001125682
Ensembl:
ENSPPYG00000000853
UniProt:
Q5RAP4
LinkDB
All DBs
Position
1:98830009..98854922
Genome browser
AA seq
518 aa
AA seq
DB search
MDRAPQRQHQASRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQR
CNAAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQRQQQQQEPVVKTPPAGAQGADTLTYTLGLPDGQLPLGSSPDLPEASACPPGLLKAS
GSGPSYSNNLAKAGLNGASCHLEYSPERGKAEGRESFYSTGSQLTPDRCGLRFEEHRHPG
LGELGQGPDSYGSPSFRSTPEAPYASLTEIEHLVQSVCKSYRETCQLRLEDLLRQRSNIF
SREEVTGYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIVLLKAGAVEV
VLVRMCRAYNADNRTVFFEGKYGGMELFRALGCSELISSIFDFSHSLSALHFSEDEIALY
TALVLINAYRPGLQEKRKVEQLQYNLELAFHHHLCKTHRQSILAKLPPKGKLRSLCSQHV
ERLQIFQHLHPIVVQATFPPLYKELFSTETESPVGLSK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccacagagacagcaccaagcctcacgggagctgctggctgcaaagaag
acccacacctcacaaattgaagtgatcccttgcaaaatctgtggggacaagtcgtctggg
atccactacggggttatcacctgtgaggggtgcaagggcttcttccgccggagccagcgc
tgtaacgcggcctactcctgcacccgtcagcagaactgccccatcgaccgcaccagccga
aaccgatgccagcactgccgtctgcagaaatgcctggcgctgggcatgtcccgagatgct
gtcaagttcggccgcatgtccaagaagcagagggacagcctgcatgcagaagtgcagaaa
cagctgcagcagcggcaacagcagcaacaggaaccagtggtcaagacccctccagcaggg
gcccaaggagcagataccctcacctacaccttggggctcccagacgggcagctgcccctg
ggctcctcgcctgacctgcctgaggcttctgcctgtccccctggcctcctgaaagcctca
ggctctgggccctcatattccaacaacttggccaaggcagggctcaatggggcctcatgc
caccttgaatacagccctgagcggggcaaggctgagggcagagagagcttctatagcaca
ggcagccagctgacccctgaccgatgtggacttcgttttgaggaacacaggcatcctggg
cttggggaactgggacagggcccagacagctacggcagccccagtttccgcagcacaccg
gaggcaccctatgcctccctgacagagatagagcacctggtgcagagtgtctgcaagtcc
tacagggagacatgccagctgcggctggaggacctgctgcggcagcgctccaacatcttc
tcccgggaggaagtgactggctaccagaggaagtccatgtgggagatgtgggaacgctgt
gcccaccacctcaccgaggccattcagtacgtggtggagttcgccaagaggctctcaggc
tttatggagctctgccagaatgaccagattgtgcttctcaaagcaggagcagtggaagtg
gtgctggttaggatgtgccgggcctacaatgctgacaaccgcacggtcttttttgaaggc
aaatacggtggcatggagctgttccgagccttgggctgcagcgagctcatcagctccatc
tttgacttctcccactccctaagtgccttgcacttttccgaggacgagattgccctctac
acagcccttgttctcatcaatgcctaccggccagggctccaagagaaaaggaaagtagaa
cagctgcagtacaatctggagctggcctttcatcatcatctctgcaagactcatcgccaa
agcatcctggcaaagctgccacccaaggggaagcttcggagcctgtgcagccagcatgtg
gaaaggctgcagatcttccagcacctccaccccatcgtggtccaagccactttccctcca
ctctacaaggagctcttcagcactgaaaccgagtcacctgtggggctgtccaagtga
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